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MDS_4320 MDS_4320 MDS_4319 MDS_4319 hemJ hemJ MDS_4316 MDS_4316 argC argC MDS_4321 MDS_4321 MDS_4511 MDS_4511 MDS_4510 MDS_4510 MDS_1621 MDS_1621 MDS_4323 MDS_4323 MDS_4315 MDS_4315
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4320Alanine racemase domain-containing protein. (420 aa)    
Predicted Functional Partners:
MDS_4319
2-nitropropane dioxygenase, NPD.
 
     0.829
hemJ
Hypothetical protein.
       0.785
MDS_4316
Hypothetical protein.
 
     0.588
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
       0.572
MDS_4321
Hypothetical protein.
       0.552
MDS_4511
Glucose-methanol-choline oxidoreductase.
 
     0.511
MDS_4510
Hypothetical protein.
  
     0.507
MDS_1621
FAD linked oxidase domain-containing protein.
 
    0.495
MDS_4323
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.491
MDS_4315
Hypothetical protein.
       0.483
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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