STRINGSTRING
MDS_4332 MDS_4332 MDS_4805 MDS_4805 MDS_1675 MDS_1675 MDS_3965 MDS_3965 MDS_4333 MDS_4333 MDS_0216 MDS_0216 MDS_0217 MDS_0217 MDS_0215 MDS_0215 MDS_2679 MDS_2679 MDS_1792 MDS_1792 serB serB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4332Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (226 aa)    
Predicted Functional Partners:
MDS_4805
HAD family hydrolase.
  
  
 
0.925
MDS_1675
HAD family hydrolase.
  
  
0.922
MDS_3965
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.916
MDS_4333
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.908
MDS_0216
Glycolate oxidase FAD binding subunit.
    
 0.906
MDS_0217
Glycolate oxidase subunit GlcD.
    
 0.906
MDS_0215
Glycolate oxidase iron-sulfur subunit.
    
 0.904
MDS_2679
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.900
MDS_1792
Amino acid adenylation domain-containing protein.
  
  
 0.555
serB
Phosphoserine phosphatase.
  
  
 0.487
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.