STRINGSTRING
MDS_4388 MDS_4388 MDS_4389 MDS_4389 MDS_1059 MDS_1059 MDS_4387 MDS_4387 MDS_1792 MDS_1792 MDS_2699 MDS_2699 MDS_0506 MDS_0506 MDS_2080 MDS_2080 MDS_4384 MDS_4384
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4388TetR family transcriptional regulator. (193 aa)    
Predicted Functional Partners:
MDS_4389
Alpha/beta hydrolase-like protein.
       0.795
MDS_1059
TetR family transcriptional regulator.
  
     0.714
MDS_4387
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
   
   0.578
MDS_1792
Amino acid adenylation domain-containing protein.
     
 0.494
MDS_2699
TetR family transcriptional regulator.
  
     0.486
MDS_0506
Transcriptional regulatory protein, TetR family.
  
   
 0.441
MDS_2080
TetR family transcriptional regulator.
  
     0.431
MDS_4384
Glutamine amidotransferase, class I.
       0.406
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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