STRINGSTRING
hutI hutI hutU hutU hutG hutG hutH hutH MDS_0621 MDS_0621 hutC hutC MDS_4394 MDS_4394 MDS_4397 MDS_4397 MDS_0524 MDS_0524 MDS_0525 MDS_0525 speB speB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase. (405 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.998
hutG
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
 
 
 0.994
hutH
Histidine ammonia-lyase.
 
  
 0.982
MDS_0621
Histidine ammonia-lyase.
 
  
 0.961
hutC
GntR family transcriptional regulator.
 
  
 0.869
MDS_4394
Nucleoside recognition domain-containing protein.
 
     0.661
MDS_4397
Hypothetical protein.
 
     0.648
MDS_0524
Binding-protein-dependent transport systems inner membrane component.
  
    0.590
MDS_0525
Glycine betaine/L-proline ABC transporter, ATPase subunit.
  
    0.586
speB
Putative agmatinase; Belongs to the arginase family.
  
  
 0.571
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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