STRINGSTRING
MDS_4400 MDS_4400 fadB fadB MDS_2116 MDS_2116 MDS_2754 MDS_2754 nuoC nuoC MDS_1792 MDS_1792 MDS_2012 MDS_2012 MDS_2011 MDS_2011 MDS_2010 MDS_2010 MDS_0530 MDS_0530 MDS_1554 MDS_1554
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
MDS_4400acyl-CoA dehydrogenase domain-containing protein. (601 aa)    
Predicted Functional Partners:
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.937
MDS_2116
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
  
 0.853
MDS_2754
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
  
 0.853
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.778
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.773
MDS_2012
Electron transfer flavoprotein, alpha subunit.
 
 
 0.713
MDS_2011
Electron transfer flavoprotein beta-subunit.
 
 
 0.672
MDS_2010
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 
 0.671
MDS_0530
Electron transfer flavoprotein, alpha subunit.
 
 
 0.650
MDS_1554
long-chain-fatty-acid--CoA ligase.
 
 
 0.629
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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