STRINGSTRING
MDS_4417 MDS_4417 MDS_4418 MDS_4418 MDS_4421 MDS_4421 MDS_4422 MDS_4422 MDS_4875 MDS_4875 MDS_2873 MDS_2873 MDS_2872 MDS_2872 MDS_2636 MDS_2636 MDS_4416 MDS_4416 MDS_4420 MDS_4420 guaA guaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4417CBS domain-containing protein. (643 aa)    
Predicted Functional Partners:
MDS_4418
DNA polymerase III, epsilon subunit.
 
     0.951
MDS_4421
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.893
MDS_4422
Membrane protein-like protein.
 
     0.770
MDS_4875
DNA polymerase III subunit epsilon.
 
    0.714
MDS_2873
Acetate permease.
 
  
 0.704
MDS_2872
Hypothetical protein.
 
  
 0.674
MDS_2636
Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.633
MDS_4416
Hypothetical protein.
 
     0.596
MDS_4420
Hypothetical protein.
 
     0.485
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.473
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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