Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1792 | MDS_4438 | MDS_1792 | MDS_4438 | Amino acid adenylation domain-containing protein. | Putative acyltransferase. | 0.620 |
MDS_1792 | plsB | MDS_1792 | MDS_3360 | Amino acid adenylation domain-containing protein. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.636 |
MDS_2768 | MDS_4438 | MDS_2768 | MDS_4438 | Hypothetical protein. | Putative acyltransferase. | 0.506 |
MDS_4436 | MDS_4437 | MDS_4436 | MDS_4437 | Hypothetical protein. | Metal dependent phosphohydrolase. | 0.568 |
MDS_4436 | MDS_4438 | MDS_4436 | MDS_4438 | Hypothetical protein. | Putative acyltransferase. | 0.440 |
MDS_4437 | MDS_4436 | MDS_4437 | MDS_4436 | Metal dependent phosphohydrolase. | Hypothetical protein. | 0.568 |
MDS_4437 | MDS_4438 | MDS_4437 | MDS_4438 | Metal dependent phosphohydrolase. | Putative acyltransferase. | 0.518 |
MDS_4438 | MDS_1792 | MDS_4438 | MDS_1792 | Putative acyltransferase. | Amino acid adenylation domain-containing protein. | 0.620 |
MDS_4438 | MDS_2768 | MDS_4438 | MDS_2768 | Putative acyltransferase. | Hypothetical protein. | 0.506 |
MDS_4438 | MDS_4436 | MDS_4438 | MDS_4436 | Putative acyltransferase. | Hypothetical protein. | 0.440 |
MDS_4438 | MDS_4437 | MDS_4438 | MDS_4437 | Putative acyltransferase. | Metal dependent phosphohydrolase. | 0.518 |
MDS_4438 | MDS_4439 | MDS_4438 | MDS_4439 | Putative acyltransferase. | Putative ABC transporter binding protein subunit. | 0.419 |
MDS_4438 | plsB | MDS_4438 | MDS_3360 | Putative acyltransferase. | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | 0.618 |
MDS_4439 | MDS_4438 | MDS_4439 | MDS_4438 | Putative ABC transporter binding protein subunit. | Putative acyltransferase. | 0.419 |
plsB | MDS_1792 | MDS_3360 | MDS_1792 | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | Amino acid adenylation domain-containing protein. | 0.636 |
plsB | MDS_4438 | MDS_3360 | MDS_4438 | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. | Putative acyltransferase. | 0.618 |