STRINGSTRING
MDS_4455 MDS_4455 MDS_4456 MDS_4456 MDS_0529 MDS_0529 MDS_0531 MDS_0531 MDS_0534 MDS_0534 MDS_0532 MDS_0532 MDS_4448 MDS_4448 nuoC nuoC MDS_1627 MDS_1627 fdhA fdhA MDS_0535 MDS_0535
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4455Oxidoreductase FAD-binding subunit. (367 aa)    
Predicted Functional Partners:
MDS_4456
Rieske (2Fe-2S) domain-containing protein.
  
 0.980
MDS_0529
Electron transfer flavoprotein beta-subunit.
 
  
 0.951
MDS_0531
Hypothetical protein.
 
  
 0.944
MDS_0534
Hypothetical protein.
 
    0.926
MDS_0532
Putative FMN oxidoreductase.
 
 
 0.924
MDS_4448
Sarcosine oxidase alpha subunit family protein; Belongs to the GcvT family.
 
 
 0.920
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.882
MDS_1627
MOSC domain-containing protein.
     0.862
fdhA
Alcohol dehydrogenase.
 
  
 0.861
MDS_0535
Membrane dipeptidase.
  
    0.846
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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