Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1689 | MDS_4480 | MDS_1689 | MDS_4480 | Type IV pilus assembly PilZ. | GTPase (dynamin-related)-like protein. | 0.548 |
MDS_2585 | MDS_4480 | MDS_2585 | MDS_4480 | Peptidase M48, Ste24p. | GTPase (dynamin-related)-like protein. | 0.576 |
MDS_3814 | MDS_4480 | MDS_3814 | MDS_4480 | ATPase central domain-containing protein. | GTPase (dynamin-related)-like protein. | 0.543 |
MDS_4322 | MDS_4480 | MDS_4322 | MDS_4480 | ATPase central domain-containing protein. | GTPase (dynamin-related)-like protein. | 0.543 |
MDS_4480 | MDS_1689 | MDS_4480 | MDS_1689 | GTPase (dynamin-related)-like protein. | Type IV pilus assembly PilZ. | 0.548 |
MDS_4480 | MDS_2585 | MDS_4480 | MDS_2585 | GTPase (dynamin-related)-like protein. | Peptidase M48, Ste24p. | 0.576 |
MDS_4480 | MDS_3814 | MDS_4480 | MDS_3814 | GTPase (dynamin-related)-like protein. | ATPase central domain-containing protein. | 0.543 |
MDS_4480 | MDS_4322 | MDS_4480 | MDS_4322 | GTPase (dynamin-related)-like protein. | ATPase central domain-containing protein. | 0.543 |
MDS_4480 | MDS_4483 | MDS_4480 | MDS_4483 | GTPase (dynamin-related)-like protein. | Hypothetical protein. | 0.579 |
MDS_4480 | MDS_4529 | MDS_4480 | MDS_4529 | GTPase (dynamin-related)-like protein. | Sulfate transporter/antisigma-factor antagonist STAS. | 0.520 |
MDS_4480 | htpX | MDS_4480 | MDS_2239 | GTPase (dynamin-related)-like protein. | Heat shock protein HtpX; Belongs to the peptidase M48B family. | 0.576 |
MDS_4480 | metW | MDS_4480 | MDS_4482 | GTPase (dynamin-related)-like protein. | Methionine biosynthesis protein MetW. | 0.600 |
MDS_4480 | metXS | MDS_4480 | MDS_4481 | GTPase (dynamin-related)-like protein. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. | 0.600 |
MDS_4480 | rdgB | MDS_4480 | MDS_4484 | GTPase (dynamin-related)-like protein. | Putative deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.586 |
MDS_4483 | MDS_4480 | MDS_4483 | MDS_4480 | Hypothetical protein. | GTPase (dynamin-related)-like protein. | 0.579 |
MDS_4483 | metW | MDS_4483 | MDS_4482 | Hypothetical protein. | Methionine biosynthesis protein MetW. | 0.941 |
MDS_4483 | metXS | MDS_4483 | MDS_4481 | Hypothetical protein. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. | 0.768 |
MDS_4483 | rdgB | MDS_4483 | MDS_4484 | Hypothetical protein. | Putative deoxyribonucleotide triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.902 |
MDS_4529 | MDS_4480 | MDS_4529 | MDS_4480 | Sulfate transporter/antisigma-factor antagonist STAS. | GTPase (dynamin-related)-like protein. | 0.520 |
htpX | MDS_4480 | MDS_2239 | MDS_4480 | Heat shock protein HtpX; Belongs to the peptidase M48B family. | GTPase (dynamin-related)-like protein. | 0.576 |
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