STRINGSTRING
MDS_4532 MDS_4532 MDS_4533 MDS_4533 MDS_4531 MDS_4531 MDS_4530 MDS_4530 MDS_4534 MDS_4534 MDS_4139 MDS_4139 MDS_2529 MDS_2529 cheB-3 cheB-3 MDS_4528 MDS_4528 MDS_1815 MDS_1815 MDS_3170 MDS_3170
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4532Chemotaxis sensory transducer. (547 aa)    
Predicted Functional Partners:
MDS_4533
CheW-like protein.
 
 0.991
MDS_4531
CheW protein.
 
 0.989
MDS_4530
CheA signal transduction histidine kinase.
 
 0.988
MDS_4534
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.987
MDS_4139
Putative chemotaxis sensor/effector fusion protein.
 
 
 0.975
MDS_2529
Putative CheW protein.
 
 0.973
cheB-3
cheB-1; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.972
MDS_4528
Two-component system sensor histidine kinase/response regulator, putative.
 
 0.968
MDS_1815
Putative CheW protein.
 
 0.967
MDS_3170
Integral membrane sensor hybrid histidine protein kinase.
  
 
 0.967
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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