Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_1792 | MDS_4551 | MDS_1792 | MDS_4551 | Amino acid adenylation domain-containing protein. | HAD family hydrolase. | 0.619 |
MDS_1792 | cysE | MDS_1792 | MDS_3778 | Amino acid adenylation domain-containing protein. | Serine O-acetyltransferase. | 0.631 |
MDS_1792 | hisA | MDS_1792 | MDS_4585 | Amino acid adenylation domain-containing protein. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | 0.481 |
MDS_1792 | hisB | MDS_1792 | MDS_4588 | Amino acid adenylation domain-containing protein. | Imidazoleglycerol-phosphate dehydratase. | 0.415 |
MDS_1792 | hisF | MDS_1792 | MDS_4584 | Amino acid adenylation domain-containing protein. | Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.636 |
MDS_1792 | hisI | MDS_1792 | MDS_0558 | Amino acid adenylation domain-containing protein. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.784 |
MDS_1792 | rppH | MDS_1792 | MDS_4550 | Amino acid adenylation domain-containing protein. | Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.484 |
MDS_1792 | serC | MDS_1792 | MDS_1955 | Amino acid adenylation domain-containing protein. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.455 |
MDS_4551 | MDS_1792 | MDS_4551 | MDS_1792 | HAD family hydrolase. | Amino acid adenylation domain-containing protein. | 0.619 |
MDS_4551 | cysE | MDS_4551 | MDS_3778 | HAD family hydrolase. | Serine O-acetyltransferase. | 0.592 |
MDS_4551 | hisA | MDS_4551 | MDS_4585 | HAD family hydrolase. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | 0.600 |
MDS_4551 | hisB | MDS_4551 | MDS_4588 | HAD family hydrolase. | Imidazoleglycerol-phosphate dehydratase. | 0.638 |
MDS_4551 | hisF | MDS_4551 | MDS_4584 | HAD family hydrolase. | Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.803 |
MDS_4551 | hisH | MDS_4551 | MDS_4587 | HAD family hydrolase. | Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.678 |
MDS_4551 | hisI | MDS_4551 | MDS_0558 | HAD family hydrolase. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.644 |
MDS_4551 | hisZ | MDS_4551 | MDS_0715 | HAD family hydrolase. | ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine. | 0.769 |
MDS_4551 | rppH | MDS_4551 | MDS_4550 | HAD family hydrolase. | Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.631 |
MDS_4551 | serC | MDS_4551 | MDS_1955 | HAD family hydrolase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.725 |
cysE | MDS_1792 | MDS_3778 | MDS_1792 | Serine O-acetyltransferase. | Amino acid adenylation domain-containing protein. | 0.631 |
cysE | MDS_4551 | MDS_3778 | MDS_4551 | Serine O-acetyltransferase. | HAD family hydrolase. | 0.592 |
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