Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_2941 | MDS_4629 | MDS_2941 | MDS_4629 | Hypothetical protein. | Sulfate ABC transporter, periplasmic sulfate-binding protein. | 0.905 |
MDS_2941 | MDS_4673 | MDS_2941 | MDS_4673 | Hypothetical protein. | Sulfate ABC transporter, periplasmic sulfate-binding protein. | 0.905 |
MDS_2941 | cysA | MDS_2941 | MDS_4676 | Hypothetical protein. | Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.905 |
MDS_2941 | cysC | MDS_2941 | MDS_0978 | Hypothetical protein. | Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.918 |
MDS_2941 | cysD | MDS_2941 | MDS_0977 | Hypothetical protein. | Sulfate adenylyltransferase subunit 2. | 0.917 |
MDS_2941 | cysT | MDS_2941 | MDS_4628 | Hypothetical protein. | Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.900 |
MDS_2941 | cysT-2 | MDS_2941 | MDS_4674 | Hypothetical protein. | Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.900 |
MDS_2941 | cysW | MDS_2941 | MDS_4627 | Hypothetical protein. | Sulfate ABC transporter, inner membrane subunit CysW. | 0.900 |
MDS_2941 | cysW-2 | MDS_2941 | MDS_4675 | Hypothetical protein. | Sulfate ABC transporter permease protein. | 0.900 |
MDS_4629 | MDS_2941 | MDS_4629 | MDS_2941 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Hypothetical protein. | 0.905 |
MDS_4629 | MDS_4673 | MDS_4629 | MDS_4673 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Sulfate ABC transporter, periplasmic sulfate-binding protein. | 0.965 |
MDS_4629 | cysA | MDS_4629 | MDS_4676 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.996 |
MDS_4629 | cysC | MDS_4629 | MDS_0978 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.995 |
MDS_4629 | cysD | MDS_4629 | MDS_0977 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Sulfate adenylyltransferase subunit 2. | 0.988 |
MDS_4629 | cysT | MDS_4629 | MDS_4628 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.997 |
MDS_4629 | cysT-2 | MDS_4629 | MDS_4674 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.996 |
MDS_4629 | cysW | MDS_4629 | MDS_4627 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Sulfate ABC transporter, inner membrane subunit CysW. | 0.997 |
MDS_4629 | cysW-2 | MDS_4629 | MDS_4675 | Sulfate ABC transporter, periplasmic sulfate-binding protein. | Sulfate ABC transporter permease protein. | 0.996 |
MDS_4672 | MDS_4673 | MDS_4672 | MDS_4673 | Hypothetical protein. | Sulfate ABC transporter, periplasmic sulfate-binding protein. | 0.907 |
MDS_4672 | cysA | MDS_4672 | MDS_4676 | Hypothetical protein. | Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.621 |
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