STRINGSTRING
MDS_4686 MDS_4686 MDS_4689 MDS_4689 MDS_4687 MDS_4687 MDS_1792 MDS_1792 MDS_2282 MDS_2282 MDS_2717 MDS_2717 MDS_2898 MDS_2898 MDS_3804 MDS_3804 MDS_2460 MDS_2460 MDS_4558 MDS_4558 nnrD nnrD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
MDS_4686Isochorismatase hydrolase. (209 aa)    
Predicted Functional Partners:
MDS_4689
Amidohydrolase 3.
 
   
 0.788
MDS_4687
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.692
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.638
MDS_2282
OsmC family protein.
  
  
 0.571
MDS_2717
Chaperone protein HchA.
 
   0.520
MDS_2898
Putative DNA-binding protein.
   
    0.520
MDS_3804
Isochorismatase hydrolase.
  
     0.498
MDS_2460
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
   0.448
MDS_4558
Hypothetical protein.
   
  
 0.424
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.411
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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