Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_4790 | MDS_4791 | TRAP transporter, 4TM/12TM fusion protein. | Immunogenic protein. | 0.990 |
MDS_4790 | MDS_4795 | TRAP transporter, 4TM/12TM fusion protein. | TRAP transporter solute receptor TAXI family protein. | 0.983 |
MDS_4791 | MDS_4790 | Immunogenic protein. | TRAP transporter, 4TM/12TM fusion protein. | 0.990 |
MDS_4791 | MDS_4795 | Immunogenic protein. | TRAP transporter solute receptor TAXI family protein. | 0.901 |
MDS_4791 | MDS_4887 | Immunogenic protein. | TRAP transporter, 4TM/12TM fusion protein. | 0.842 |
MDS_4795 | MDS_4790 | TRAP transporter solute receptor TAXI family protein. | TRAP transporter, 4TM/12TM fusion protein. | 0.983 |
MDS_4795 | MDS_4791 | TRAP transporter solute receptor TAXI family protein. | Immunogenic protein. | 0.901 |
MDS_4795 | MDS_4796 | TRAP transporter solute receptor TAXI family protein. | AraC family transcriptional regulator. | 0.525 |
MDS_4795 | MDS_4797 | TRAP transporter solute receptor TAXI family protein. | Hypothetical protein. | 0.408 |
MDS_4795 | MDS_4887 | TRAP transporter solute receptor TAXI family protein. | TRAP transporter, 4TM/12TM fusion protein. | 0.840 |
MDS_4796 | MDS_4795 | AraC family transcriptional regulator. | TRAP transporter solute receptor TAXI family protein. | 0.525 |
MDS_4796 | MDS_4797 | AraC family transcriptional regulator. | Hypothetical protein. | 0.598 |
MDS_4797 | MDS_4795 | Hypothetical protein. | TRAP transporter solute receptor TAXI family protein. | 0.408 |
MDS_4797 | MDS_4796 | Hypothetical protein. | AraC family transcriptional regulator. | 0.598 |
MDS_4887 | MDS_4791 | TRAP transporter, 4TM/12TM fusion protein. | Immunogenic protein. | 0.842 |
MDS_4887 | MDS_4795 | TRAP transporter, 4TM/12TM fusion protein. | TRAP transporter solute receptor TAXI family protein. | 0.840 |