STRINGSTRING
MDS_4804 MDS_4804 MDS_0180 MDS_0180 MDS_4803 MDS_4803 MDS_1077 MDS_1077 MDS_1075 MDS_1075 MDS_1508 MDS_1508 MDS_1347 MDS_1347 MDS_1766 MDS_1766 MDS_2561 MDS_2561 MDS_3781 MDS_3781 MDS_3463 MDS_3463
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4804Hypothetical protein. (76 aa)    
Predicted Functional Partners:
MDS_0180
Hypothetical protein.
  
     0.752
MDS_4803
Aminopeptidase-like protein.
 
     0.693
MDS_1077
Carbohydrate-binding and sugar hydrolysis.
  
     0.628
MDS_1075
poly(beta-D-mannuronate) lyase.
  
     0.626
MDS_1508
Membrane protein-like protein.
  
    0.623
MDS_1347
Hypothetical protein.
  
     0.596
MDS_1766
Alginate biosynthesis transcriptional activator.
  
     0.591
MDS_2561
DNA-binding transcriptional activator OsmE.
  
    0.584
MDS_3781
Hypothetical protein.
  
    0.572
MDS_3463
NAD(P)H dehydrogenase.
  
     0.552
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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