Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_1792 | MDS_4811 | Amino acid adenylation domain-containing protein. | GCN5-related N-acetyltransferase. | 0.478 |
MDS_1792 | MDS_4812 | Amino acid adenylation domain-containing protein. | Transferase. | 0.431 |
MDS_4811 | MDS_1792 | GCN5-related N-acetyltransferase. | Amino acid adenylation domain-containing protein. | 0.478 |
MDS_4811 | MDS_4812 | GCN5-related N-acetyltransferase. | Transferase. | 0.800 |
MDS_4811 | MDS_4813 | GCN5-related N-acetyltransferase. | Oligopeptidase A. | 0.588 |
MDS_4811 | MDS_4814 | GCN5-related N-acetyltransferase. | Nucleic acid binding protein. | 0.588 |
MDS_4811 | MDS_4815 | GCN5-related N-acetyltransferase. | Hypothetical protein. | 0.536 |
MDS_4811 | MDS_4816 | GCN5-related N-acetyltransferase. | Hypothetical protein. | 0.470 |
MDS_4812 | MDS_1792 | Transferase. | Amino acid adenylation domain-containing protein. | 0.431 |
MDS_4812 | MDS_4811 | Transferase. | GCN5-related N-acetyltransferase. | 0.800 |
MDS_4812 | MDS_4813 | Transferase. | Oligopeptidase A. | 0.591 |
MDS_4812 | MDS_4814 | Transferase. | Nucleic acid binding protein. | 0.591 |
MDS_4812 | MDS_4815 | Transferase. | Hypothetical protein. | 0.589 |
MDS_4812 | MDS_4816 | Transferase. | Hypothetical protein. | 0.479 |
MDS_4813 | MDS_4811 | Oligopeptidase A. | GCN5-related N-acetyltransferase. | 0.588 |
MDS_4813 | MDS_4812 | Oligopeptidase A. | Transferase. | 0.591 |
MDS_4813 | MDS_4814 | Oligopeptidase A. | Nucleic acid binding protein. | 0.800 |
MDS_4813 | MDS_4815 | Oligopeptidase A. | Hypothetical protein. | 0.800 |
MDS_4813 | MDS_4816 | Oligopeptidase A. | Hypothetical protein. | 0.701 |
MDS_4814 | MDS_4811 | Nucleic acid binding protein. | GCN5-related N-acetyltransferase. | 0.588 |
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