STRINGSTRING
MDS_4813 MDS_4813 MDS_4814 MDS_4814 MDS_4815 MDS_4815 MDS_4816 MDS_4816 MDS_4812 MDS_4812 MDS_4811 MDS_4811 htpG htpG groL groL apaH apaH MDS_0384 MDS_0384 hslU hslU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4813Oligopeptidase A. (682 aa)    
Predicted Functional Partners:
MDS_4814
Nucleic acid binding protein.
       0.800
MDS_4815
Hypothetical protein.
       0.800
MDS_4816
Hypothetical protein.
       0.701
MDS_4812
Transferase.
       0.591
MDS_4811
GCN5-related N-acetyltransferase.
       0.588
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
  
 0.502
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.473
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
  
  
 0.441
MDS_0384
Peptidase M24.
 
 
 
 0.414
hslU
ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.
  
  
 0.413
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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