STRINGSTRING
MDS_4820 MDS_4820 MDS_4819 MDS_4819 MDS_4821 MDS_4821 MDS_2413 MDS_2413 MDS_4818 MDS_4818 MDS_0103 MDS_0103 MDS_4817 MDS_4817
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4820Radical SAM domain-containing protein. (353 aa)    
Predicted Functional Partners:
MDS_4819
Hypothetical protein.
       0.582
MDS_4821
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.530
MDS_2413
ATP-dependent DNA ligase.
 
   
 0.523
MDS_4818
Bile acid:sodium symporter.
       0.511
MDS_0103
Nucleoside recognition domain-containing protein.
     
 0.467
MDS_4817
AraC family transcriptional regulator.
       0.408
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.