STRINGSTRING
MDS_4824 MDS_4824 MDS_0263 MDS_0263 MDS_2592 MDS_2592 MDS_1535 MDS_1535 MDS_3172 MDS_3172 MDS_3453 MDS_3453 MDS_4825 MDS_4825 oadA oadA accC-2 accC-2 MDS_1705 MDS_1705 MDS_2593 MDS_2593
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4824LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (324 aa)    
Predicted Functional Partners:
MDS_0263
LysR family transcriptional regulator.
  
     0.755
MDS_2592
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.659
MDS_1535
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.648
MDS_3172
Transcriptional regulator, LysR family.
  
     0.617
MDS_3453
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.610
MDS_4825
Hypothetical protein.
       0.579
oadA
Pyruvate carboxylase subunit B.
       0.577
accC-2
Pyruvate carboxylase subunit A; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.577
MDS_1705
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.566
MDS_2593
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.542
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.