STRINGSTRING
MDS_4857 MDS_4857 MDS_0359 MDS_0359 hemA hemA MDS_4179 MDS_4179 hemL hemL MDS_2891 MDS_2891 MDS_1792 MDS_1792 MDS_4858 MDS_4858 hemC hemC MDS_0403 MDS_0403 MDS_1791 MDS_1791
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4857Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (464 aa)    
Predicted Functional Partners:
MDS_0359
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.970
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.966
MDS_4179
Glutamate-1-semialdehyde aminotransferase.
  
  
 
0.923
hemL
Glutamate-1-semialdehyde aminotransferase.
  
  
 
0.921
MDS_2891
5-aminolevulinate synthase.
     
 0.906
MDS_1792
Amino acid adenylation domain-containing protein.
 
 
 0.860
MDS_4858
L-glutamine synthetase.
    0.771
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.701
MDS_0403
Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
   
 0.651
MDS_1791
Amino acid adenylation domain-containing protein.
 
 
 0.637
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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