STRINGSTRING
MDS_4873 MDS_4873 MDS_4872 MDS_4872 MDS_4871 MDS_4871 MDS_3652 MDS_3652 MDS_4874 MDS_4874 MDS_4875 MDS_4875
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_4873LemA family protein. (188 aa)    
Predicted Functional Partners:
MDS_4872
Hypothetical protein.
 
     0.943
MDS_4871
Hypothetical protein.
 
     0.870
MDS_3652
Hypothetical protein.
 
    0.571
MDS_4874
CBS domain-containing protein.
       0.548
MDS_4875
DNA polymerase III subunit epsilon.
       0.545
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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