STRINGSTRING
MMP0020 MMP0020 MMP0021 MMP0021 MMP0019 MMP0019 MMP1224 MMP1224 MMP0204 MMP0204 rpoE2 rpoE2 MMP1036 MMP1036 MMP0852 MMP0852 ehbQ ehbQ MMP0694 MMP0694 MMP0457 MMP0457
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP0020Conserved hypothetical protein; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (141 aa)    
Predicted Functional Partners:
MMP0021
Conserved hypothetical archaeal protein.
       0.786
MMP0019
Hypothetical protein.
       0.554
MMP1224
ABC-type amino acid transport/signal transduction systems periplasmic component-related.
  
  
 0.552
MMP0204
Conserved hypothetical protein; Contains flavoprotein domain.
  
  
 0.535
rpoE2
DNA-directed RNA polymerase subunit E; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.
     
 0.526
MMP1036
Band 7 protein:Stomatin.
   
  
 0.520
MMP0852
Conserved hypothetical protein.
   
  
 0.515
ehbQ
Conserved hypothetical protein; Citation: Tersteegen, A. and R. Hedderich. 1999. Eur. J. Biochem. 264:930-43. Curr. Opin. Struct. Biol. 2001; 11:694-700.
   
  
 0.511
MMP0694
Beta-lactamase-like:KH domain.
     
 0.510
MMP0457
Probable ATP dependent RNA helicase; Citation: Mol. Cell 2001; 8:251-62. Nucleic Acids Res. 1999; 27:3811-20. Prog. Nucleic Acid Res. Biol. 2002; 72:307-31, PNAS (2001) 98:; Belongs to the DEAD box helicase family.
     
 0.507
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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