STRINGSTRING
pelA pelA rps3ae rps3ae rpl21e rpl21e MMP0382 MMP0382 rpl15 rpl15 rpl30e rpl30e rpl37ae rpl37ae rps6e rps6e rps24e rps24e rps17e rps17e rpmC rpmC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pelAConserved hypothetical protein; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity. (348 aa)    
Predicted Functional Partners:
rps3ae
SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 
 0.961
rpl21e
Ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
 
 
   0.957
MMP0382
RNase L inhibitor; Citation: J Bio Chem 270:13308-13317 1995.
 
 
 0.957
rpl15
LSU ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family.
 
 
   0.955
rpl30e
Ribosomal protein L30E; Belongs to the eukaryotic ribosomal protein eL30 family.
 
 
 
 0.952
rpl37ae
Ribosomal L37ae protein; Binds to the 23S rRNA.
  
   0.941
rps6e
Ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
 
 
 
 0.941
rps24e
SSU ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 
   0.936
rps17e
30S ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family.
 
 
 
 0.935
rpmC
LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family.
 
 
 
 0.933
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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