Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MMP0089 | cbiC | MMP0089 | MMP0330 | Conserved hypothetical protein. | Precorrin-8X methylmutase CbiC/CobH. | 0.554 |
MMP0089 | cbiD | MMP0089 | MMP1203 | Conserved hypothetical protein. | Cobalamin (vitamin B12) biosynthesis CbiD protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.711 |
MMP0089 | cbiE | MMP0089 | MMP1227 | Conserved hypothetical protein. | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase. | 0.590 |
MMP0089 | cbiG | MMP0089 | MMP1591 | Conserved hypothetical protein. | Cobalamin (vitamin B12) biosynthesis CbiG protein. | 0.728 |
MMP0089 | cbiJ | MMP0089 | MMP0599 | Conserved hypothetical protein. | Precorrin-6x reductase CbiJ/CobK. | 0.552 |
MMP0089 | cbiL | MMP0089 | MMP0319 | Conserved hypothetical protein. | Precorrin-2 C-20 methyltransferase; Belongs to the precorrin methyltransferase family. | 0.968 |
MMP0089 | cbiX(s) | MMP0089 | MMP0164 | Conserved hypothetical protein. | Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the insertion of Ni(2+) into sirohydrochlorin to yield Ni- sirohydrochlorin. | 0.988 |
MMP0089 | cobA | MMP0089 | MMP0966 | Conserved hypothetical protein. | uroporphyrin-III C-methyltransferase; Citation: J Bacteriol. 1991 Aug;173(15):4637-45; Belongs to the precorrin methyltransferase family. | 0.993 |
MMP0089 | gtrA | MMP0089 | MMP0088 | Conserved hypothetical protein. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.976 |
MMP0493 | cbiC | MMP0493 | MMP0330 | Probable metal chelatase. | Precorrin-8X methylmutase CbiC/CobH. | 0.793 |
MMP0493 | cbiD | MMP0493 | MMP1203 | Probable metal chelatase. | Cobalamin (vitamin B12) biosynthesis CbiD protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.713 |
MMP0493 | cbiE | MMP0493 | MMP1227 | Probable metal chelatase. | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase. | 0.893 |
MMP0493 | cbiG | MMP0493 | MMP1591 | Probable metal chelatase. | Cobalamin (vitamin B12) biosynthesis CbiG protein. | 0.551 |
MMP0493 | cbiJ | MMP0493 | MMP0599 | Probable metal chelatase. | Precorrin-6x reductase CbiJ/CobK. | 0.721 |
MMP0493 | cbiL | MMP0493 | MMP0319 | Probable metal chelatase. | Precorrin-2 C-20 methyltransferase; Belongs to the precorrin methyltransferase family. | 0.769 |
MMP0493 | cbiX(s) | MMP0493 | MMP0164 | Probable metal chelatase. | Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the insertion of Ni(2+) into sirohydrochlorin to yield Ni- sirohydrochlorin. | 0.874 |
MMP0493 | cobA | MMP0493 | MMP0966 | Probable metal chelatase. | uroporphyrin-III C-methyltransferase; Citation: J Bacteriol. 1991 Aug;173(15):4637-45; Belongs to the precorrin methyltransferase family. | 0.471 |
MMP0493 | gtrA | MMP0493 | MMP0088 | Probable metal chelatase. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.568 |
cbiC | MMP0089 | MMP0330 | MMP0089 | Precorrin-8X methylmutase CbiC/CobH. | Conserved hypothetical protein. | 0.554 |
cbiC | MMP0493 | MMP0330 | MMP0493 | Precorrin-8X methylmutase CbiC/CobH. | Probable metal chelatase. | 0.793 |
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