Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MMP0361 | MMP0424 | Hypothetical protein. | Hypothetical. | 0.850 |
MMP0361 | MMP0461 | Hypothetical protein. | Hypothetical. | 0.855 |
MMP0361 | MMP0484 | Hypothetical protein. | Possible sodium/proton antiporter. | 0.926 |
MMP0361 | MMP0517 | Hypothetical protein. | Conserved hypothetical protein. | 0.666 |
MMP0361 | MMP0662 | Hypothetical protein. | Hypothetical protein. | 0.854 |
MMP0361 | MMP0731 | Hypothetical protein. | Exonuclease VII, small subunit related protein. | 0.852 |
MMP0361 | MMP0751 | Hypothetical protein. | Conserved hypothetical archaeal protein. | 0.924 |
MMP0361 | MMP1572 | Hypothetical protein. | Hypothetical protein. | 0.858 |
MMP0361 | MMP1620 | Hypothetical protein. | Hypothetical. | 0.923 |
MMP0361 | MMP1655 | Hypothetical protein. | Conserved hypothetical protein. | 0.851 |
MMP0424 | MMP0361 | Hypothetical. | Hypothetical protein. | 0.850 |
MMP0424 | MMP0461 | Hypothetical. | Hypothetical. | 0.687 |
MMP0424 | MMP0484 | Hypothetical. | Possible sodium/proton antiporter. | 0.856 |
MMP0424 | MMP0517 | Hypothetical. | Conserved hypothetical protein. | 0.606 |
MMP0424 | MMP0662 | Hypothetical. | Hypothetical protein. | 0.853 |
MMP0424 | MMP0731 | Hypothetical. | Exonuclease VII, small subunit related protein. | 0.855 |
MMP0424 | MMP0751 | Hypothetical. | Conserved hypothetical archaeal protein. | 0.606 |
MMP0424 | MMP1572 | Hypothetical. | Hypothetical protein. | 0.917 |
MMP0424 | MMP1620 | Hypothetical. | Hypothetical. | 0.856 |
MMP0424 | MMP1655 | Hypothetical. | Conserved hypothetical protein. | 0.676 |
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