Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MMP0461 | MMP0473 | Hypothetical. | Hypothetical protein. | 0.457 |
MMP0461 | MMP0474 | Hypothetical. | Hypothetical protein. | 0.455 |
MMP0461 | MMP0475 | Hypothetical. | Hypothetical protein. | 0.780 |
MMP0461 | MMP0769 | Hypothetical. | Conserved hypothetical archaeal protein. | 0.491 |
MMP0461 | MMP0796 | Hypothetical. | Probable sugar efflux transporter. | 0.605 |
MMP0469 | MMP0470 | Hypothetical protein. | MCM family related protein; Citation: Nucleic Acids Res. 1992; 20: 5571-7. Molec. Microbiol. 1998; 29: 955-961; Belongs to the MCM family. | 0.986 |
MMP0469 | MMP0471 | Hypothetical protein. | Conserved hypothetical protein. | 0.981 |
MMP0469 | MMP0472 | Hypothetical protein. | Probable integrase/recombinase; Citation: J. Mol. Biol. (2003) 330: 15-27, PNAS (2001) 98: 652-657. | 0.982 |
MMP0469 | MMP0473 | Hypothetical protein. | Hypothetical protein. | 0.519 |
MMP0469 | MMP0474 | Hypothetical protein. | Hypothetical protein. | 0.486 |
MMP0470 | MMP0469 | MCM family related protein; Citation: Nucleic Acids Res. 1992; 20: 5571-7. Molec. Microbiol. 1998; 29: 955-961; Belongs to the MCM family. | Hypothetical protein. | 0.986 |
MMP0470 | MMP0471 | MCM family related protein; Citation: Nucleic Acids Res. 1992; 20: 5571-7. Molec. Microbiol. 1998; 29: 955-961; Belongs to the MCM family. | Conserved hypothetical protein. | 0.981 |
MMP0470 | MMP0472 | MCM family related protein; Citation: Nucleic Acids Res. 1992; 20: 5571-7. Molec. Microbiol. 1998; 29: 955-961; Belongs to the MCM family. | Probable integrase/recombinase; Citation: J. Mol. Biol. (2003) 330: 15-27, PNAS (2001) 98: 652-657. | 0.982 |
MMP0470 | MMP0473 | MCM family related protein; Citation: Nucleic Acids Res. 1992; 20: 5571-7. Molec. Microbiol. 1998; 29: 955-961; Belongs to the MCM family. | Hypothetical protein. | 0.537 |
MMP0470 | MMP0474 | MCM family related protein; Citation: Nucleic Acids Res. 1992; 20: 5571-7. Molec. Microbiol. 1998; 29: 955-961; Belongs to the MCM family. | Hypothetical protein. | 0.488 |
MMP0471 | MMP0469 | Conserved hypothetical protein. | Hypothetical protein. | 0.981 |
MMP0471 | MMP0470 | Conserved hypothetical protein. | MCM family related protein; Citation: Nucleic Acids Res. 1992; 20: 5571-7. Molec. Microbiol. 1998; 29: 955-961; Belongs to the MCM family. | 0.981 |
MMP0471 | MMP0472 | Conserved hypothetical protein. | Probable integrase/recombinase; Citation: J. Mol. Biol. (2003) 330: 15-27, PNAS (2001) 98: 652-657. | 0.973 |
MMP0471 | MMP0473 | Conserved hypothetical protein. | Hypothetical protein. | 0.519 |
MMP0471 | MMP0474 | Conserved hypothetical protein. | Hypothetical protein. | 0.487 |
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