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MMP1001 MMP1001 ribK ribK dnaG dnaG rpl18e rpl18e nusA nusA MMP0091 MMP0091 nac nac gatE gatE MMP0999 MMP0999 pfdB pfdB tfe tfe
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
MMP1001Conserved hypothetical protein; Involved in DNA damage repair. (406 aa)    
Predicted Functional Partners:
ribK
Conserved hypothetical archaeal protein; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
  
     0.640
dnaG
Possible DnaG-type primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
     0.614
rpl18e
LSU Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.
  
     0.610
nusA
KH domain:KH domain, type 1; Participates in transcription termination. Belongs to the NusA family.
  
     0.610
MMP0091
Conserved hypothetical archaeal protein.
 
     0.604
nac
Conserved hypothetical archaeal protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.
  
     0.603
gatE
Glutamyl-tRNA(Gln) amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
  
     0.595
MMP0999
Conserved hypothetical membrane related protein.
 
    0.579
pfdB
Prefoldin beta subunit (GimC beta subunit); Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
  
     0.556
tfe
Transcription factor E; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems [...]
 
    0.543
Your Current Organism:
Methanococcus maripaludis S2
NCBI taxonomy Id: 267377
Other names: M. maripaludis S2, Methanococcus maripaludis LL, Methanococcus maripaludis str. S2, Methanococcus maripaludis strain S2
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