Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cheY | flaB1 | MMP0933 | MMP1666 | Chemotaxis protein CheY. | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.889 |
cheY | flaB2 | MMP0933 | MMP1667 | Chemotaxis protein CheY. | Flagellin B2; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.952 |
cheY | flaB3 | MMP0933 | MMP1668 | Chemotaxis protein CheY. | Flagellin B3; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.956 |
cheY | flaC | MMP0933 | MMP1669 | Chemotaxis protein CheY. | Flagella accessory protein C; Citation: J. Bac. 183: 7154-7164. | 0.927 |
cheY | flaD | MMP0933 | MMP1670 | Chemotaxis protein CheY. | Flagella accessory protein D; Citation: J. Bac. 183: 7154-7164. | 0.960 |
cheY | flaE | MMP0933 | MMP1671 | Chemotaxis protein CheY. | Flagella accessory protein E; Citation: J. Bac. 183: 7154-7164. | 0.961 |
cheY | flaF | MMP0933 | MMP1672 | Chemotaxis protein CheY. | Flagella accessory protein F; Citation: J. Bac. 183: 7154-7164. | 0.890 |
cheY | flaG | MMP0933 | MMP1673 | Chemotaxis protein CheY. | Flagella accessory protein G; Citation: J. Bac. 183: 7154-7164. | 0.878 |
cheY | flaI | MMP0933 | MMP1675 | Chemotaxis protein CheY. | Flagella accessory protein I; Citation: J. Bac. 183: 7154-7164. | 0.829 |
cheY | flaJ | MMP0933 | MMP1676 | Chemotaxis protein CheY. | Flagella accessory protein J; Citation: J. Bac. 183: 7154-7164. | 0.808 |
flaB1 | cheY | MMP1666 | MMP0933 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Chemotaxis protein CheY. | 0.889 |
flaB1 | flaB2 | MMP1666 | MMP1667 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagellin B2; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.986 |
flaB1 | flaB3 | MMP1666 | MMP1668 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagellin B3; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.983 |
flaB1 | flaC | MMP1666 | MMP1669 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagella accessory protein C; Citation: J. Bac. 183: 7154-7164. | 0.993 |
flaB1 | flaD | MMP1666 | MMP1670 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagella accessory protein D; Citation: J. Bac. 183: 7154-7164. | 0.992 |
flaB1 | flaE | MMP1666 | MMP1671 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagella accessory protein E; Citation: J. Bac. 183: 7154-7164. | 0.991 |
flaB1 | flaF | MMP1666 | MMP1672 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagella accessory protein F; Citation: J. Bac. 183: 7154-7164. | 0.991 |
flaB1 | flaG | MMP1666 | MMP1673 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagella accessory protein G; Citation: J. Bac. 183: 7154-7164. | 0.957 |
flaB1 | flaI | MMP1666 | MMP1675 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagella accessory protein I; Citation: J. Bac. 183: 7154-7164. | 0.954 |
flaB1 | flaJ | MMP1666 | MMP1676 | Flagellin B1 percursor; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Flagella accessory protein J; Citation: J. Bac. 183: 7154-7164. | 0.896 |
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