STRINGSTRING
ABK74135.1 ABK74135.1 ABK73376.1 ABK73376.1 ABK76132.1 ABK76132.1 ABK71501.1 ABK71501.1 ABK70017.1 ABK70017.1 ABK69999.1 ABK69999.1 ABK70373.1 ABK70373.1 ABK75410.1 ABK75410.1 ABK73223.1 ABK73223.1 ABK71345.1 ABK71345.1 ABK71850.1 ABK71850.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74135.1Putative transcriptional regulator. (197 aa)    
Predicted Functional Partners:
ABK73376.1
Conserved hypothetical protein.
  
    0.792
ABK76132.1
Transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
  
    0.765
ABK71501.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
  
    0.565
ABK70017.1
RDD family protein, putative; Identified by match to protein family HMM PF06271.
  
     0.562
ABK69999.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.554
ABK70373.1
Conserved hypothetical protein.
  
    0.541
ABK75410.1
Putative secreted protein.
  
    0.506
ABK73223.1
Conserved hypothetical protein.
  
     0.472
ABK71345.1
CalR9 protein.
  
    0.464
ABK71850.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.453
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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