Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70360.1 | ABK70955.1 | MSMEG_0108 | MSMEG_0112 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | Hypothetical protein; Identified by Glimmer2; putative. | 0.544 |
| ABK70360.1 | ABK73477.1 | MSMEG_0108 | MSMEG_0111 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | Putative magnesium transport protein; Identified by match to protein family HMM PF01544. | 0.553 |
| ABK70360.1 | ABK75496.1 | MSMEG_0108 | MSMEG_0107 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | Cell envelope-related function transcriptional attenuator common domain; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.644 |
| ABK70360.1 | pntA | MSMEG_0108 | MSMEG_0110 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | NAD(P) transhydrogenase, alpha subunit; Identified by similarity to SP:P07001; match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00561. | 0.727 |
| ABK70360.1 | pntB | MSMEG_0108 | MSMEG_0109 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.793 |
| ABK70659.1 | ABK72280.1 | MSMEG_3748 | MSMEG_1824 | Thiamin pyrophosphokinase, catalytic domain protein. | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.682 |
| ABK70659.1 | ABK74597.1 | MSMEG_3748 | MSMEG_6421 | Thiamin pyrophosphokinase, catalytic domain protein. | Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.427 |
| ABK70659.1 | ABK75496.1 | MSMEG_3748 | MSMEG_0107 | Thiamin pyrophosphokinase, catalytic domain protein. | Cell envelope-related function transcriptional attenuator common domain; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.492 |
| ABK70955.1 | ABK70360.1 | MSMEG_0112 | MSMEG_0108 | Hypothetical protein; Identified by Glimmer2; putative. | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | 0.544 |
| ABK70955.1 | ABK73477.1 | MSMEG_0112 | MSMEG_0111 | Hypothetical protein; Identified by Glimmer2; putative. | Putative magnesium transport protein; Identified by match to protein family HMM PF01544. | 0.773 |
| ABK70955.1 | ABK75496.1 | MSMEG_0112 | MSMEG_0107 | Hypothetical protein; Identified by Glimmer2; putative. | Cell envelope-related function transcriptional attenuator common domain; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.465 |
| ABK70955.1 | pntA | MSMEG_0112 | MSMEG_0110 | Hypothetical protein; Identified by Glimmer2; putative. | NAD(P) transhydrogenase, alpha subunit; Identified by similarity to SP:P07001; match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00561. | 0.576 |
| ABK70955.1 | pntB | MSMEG_0112 | MSMEG_0109 | Hypothetical protein; Identified by Glimmer2; putative. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.544 |
| ABK72280.1 | ABK70659.1 | MSMEG_1824 | MSMEG_3748 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Thiamin pyrophosphokinase, catalytic domain protein. | 0.682 |
| ABK72280.1 | ABK74340.1 | MSMEG_1824 | MSMEG_5775 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.623 |
| ABK72280.1 | ABK74597.1 | MSMEG_1824 | MSMEG_6421 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.658 |
| ABK72280.1 | ABK75496.1 | MSMEG_1824 | MSMEG_0107 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | Cell envelope-related function transcriptional attenuator common domain; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.485 |
| ABK72280.1 | rfbD | MSMEG_1824 | MSMEG_1825 | Transcriptional regulator, LytR family protein; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | dTDP-4-dehydrorhamnose reductase; Involved in the biosynthesis of the dTDP-L-rhamnose which is a component of the critical linker, D-N-acetylglucosamine-L-rhamnose disaccharide, which connects the galactan region of arabinogalactan to peptidoglycan via a phosphodiester linkage. Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L- rhamnose (By similarity); Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.945 |
| ABK73477.1 | ABK70360.1 | MSMEG_0111 | MSMEG_0108 | Putative magnesium transport protein; Identified by match to protein family HMM PF01544. | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | 0.553 |
| ABK73477.1 | ABK70955.1 | MSMEG_0111 | MSMEG_0112 | Putative magnesium transport protein; Identified by match to protein family HMM PF01544. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
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