Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70880.1 | ABK76138.1 | MSMEG_3613 | MSMEG_0118 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.463 |
ABK71053.1 | ABK76138.1 | MSMEG_6742 | MSMEG_0118 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.579 |
ABK71375.1 | ABK76138.1 | MSMEG_1025 | MSMEG_0118 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.419 |
ABK73077.1 | ABK76138.1 | MSMEG_2305 | MSMEG_0118 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.419 |
ABK75028.1 | ABK76138.1 | MSMEG_0117 | MSMEG_0118 | Hydrolase; Identified by match to protein family HMM PF00561. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.782 |
ABK75028.1 | dehII | MSMEG_0117 | MSMEG_0115 | Hydrolase; Identified by match to protein family HMM PF00561. | Haloacid dehalogenase, type II; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493. | 0.897 |
ABK75971.1 | ABK76138.1 | MSMEG_2211 | MSMEG_0118 | Identified by match to protein family HMM PF01381. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.421 |
ABK76138.1 | ABK70880.1 | MSMEG_0118 | MSMEG_3613 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.463 |
ABK76138.1 | ABK71053.1 | MSMEG_0118 | MSMEG_6742 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.579 |
ABK76138.1 | ABK71375.1 | MSMEG_0118 | MSMEG_1025 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.419 |
ABK76138.1 | ABK73077.1 | MSMEG_0118 | MSMEG_2305 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.419 |
ABK76138.1 | ABK75028.1 | MSMEG_0118 | MSMEG_0117 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | Hydrolase; Identified by match to protein family HMM PF00561. | 0.782 |
ABK76138.1 | ABK75971.1 | MSMEG_0118 | MSMEG_2211 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | Identified by match to protein family HMM PF01381. | 0.421 |
ABK76138.1 | dehII | MSMEG_0118 | MSMEG_0115 | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | Haloacid dehalogenase, type II; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493. | 0.567 |
dehII | ABK75028.1 | MSMEG_0115 | MSMEG_0117 | Haloacid dehalogenase, type II; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493. | Hydrolase; Identified by match to protein family HMM PF00561. | 0.897 |
dehII | ABK76138.1 | MSMEG_0115 | MSMEG_0118 | Haloacid dehalogenase, type II; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493. | Conserved hypothetical protein; Identified by match to protein family HMM PF07336. | 0.567 |