Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70024.1 | ABK70725.1 | MSMEG_0147 | MSMEG_2346 | C-5 sterol desaturase. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.558 |
ABK70024.1 | ABK71037.1 | MSMEG_0147 | MSMEG_3318 | C-5 sterol desaturase. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.518 |
ABK70024.1 | ABK71069.1 | MSMEG_0147 | MSMEG_1499 | C-5 sterol desaturase. | Oxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.517 |
ABK70024.1 | ABK71124.1 | MSMEG_0147 | MSMEG_0148 | C-5 sterol desaturase. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.688 |
ABK70024.1 | ABK71803.1 | MSMEG_0147 | MSMEG_4344 | C-5 sterol desaturase. | Putative monooxygenase. | 0.520 |
ABK70024.1 | ABK72504.1 | MSMEG_0147 | MSMEG_1839 | C-5 sterol desaturase. | Alkane 1-monooxygenase; Identified by match to protein family HMM PF00487. | 0.517 |
ABK70024.1 | ABK74772.1 | MSMEG_0147 | MSMEG_0146 | C-5 sterol desaturase. | Mosc domain protein; Identified by match to protein family HMM PF03473. | 0.696 |
ABK70024.1 | ABK75365.1 | MSMEG_0147 | MSMEG_5719 | C-5 sterol desaturase. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.518 |
ABK70024.1 | ABK75925.1 | MSMEG_0147 | MSMEG_1699 | C-5 sterol desaturase. | Pentachlorophenol 4-monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.517 |
ABK70024.1 | mhpA | MSMEG_0147 | MSMEG_4866 | C-5 sterol desaturase. | 3-(3-hydroxy-phenyl)propionate hydroxylase; Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3-hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI). | 0.520 |
ABK70725.1 | ABK70024.1 | MSMEG_2346 | MSMEG_0147 | Phytoene synthase; Identified by match to protein family HMM PF00494. | C-5 sterol desaturase. | 0.558 |
ABK71037.1 | ABK70024.1 | MSMEG_3318 | MSMEG_0147 | Oxidoreductase; Identified by match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.518 |
ABK71069.1 | ABK70024.1 | MSMEG_1499 | MSMEG_0147 | Oxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.517 |
ABK71124.1 | ABK70024.1 | MSMEG_0148 | MSMEG_0147 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | C-5 sterol desaturase. | 0.688 |
ABK71124.1 | ABK74772.1 | MSMEG_0148 | MSMEG_0146 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Mosc domain protein; Identified by match to protein family HMM PF03473. | 0.524 |
ABK71803.1 | ABK70024.1 | MSMEG_4344 | MSMEG_0147 | Putative monooxygenase. | C-5 sterol desaturase. | 0.520 |
ABK72504.1 | ABK70024.1 | MSMEG_1839 | MSMEG_0147 | Alkane 1-monooxygenase; Identified by match to protein family HMM PF00487. | C-5 sterol desaturase. | 0.517 |
ABK74772.1 | ABK70024.1 | MSMEG_0146 | MSMEG_0147 | Mosc domain protein; Identified by match to protein family HMM PF03473. | C-5 sterol desaturase. | 0.696 |
ABK74772.1 | ABK71124.1 | MSMEG_0146 | MSMEG_0148 | Mosc domain protein; Identified by match to protein family HMM PF03473. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.524 |
ABK75365.1 | ABK70024.1 | MSMEG_5719 | MSMEG_0147 | Oxidoreductase; Identified by match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.518 |
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