Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69650.1 | ABK73695.1 | MSMEG_0743 | MSMEG_1846 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | 0.664 |
| ABK69650.1 | ABK75824.1 | MSMEG_0743 | MSMEG_3411 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | MOSC domain protein; Identified by match to protein family HMM PF03473. | 0.820 |
| ABK69650.1 | fdhD | MSMEG_0743 | MSMEG_0165 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.783 |
| ABK69650.1 | iscS | MSMEG_0743 | MSMEG_1242 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Cysteine desulfurase IscS; Identified by match to protein family HMM PF00266. | 0.775 |
| ABK69650.1 | moaC | MSMEG_0743 | MSMEG_5703 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.808 |
| ABK69650.1 | moaE | MSMEG_0743 | MSMEG_5701 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391. | 0.650 |
| ABK73120.1 | fdhD | MSMEG_0161 | MSMEG_0165 | Formate dehydrogenase, alpha subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.762 |
| ABK73120.1 | moaC | MSMEG_0161 | MSMEG_5703 | Formate dehydrogenase, alpha subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.474 |
| ABK73695.1 | ABK69650.1 | MSMEG_1846 | MSMEG_0743 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | 0.664 |
| ABK73695.1 | ABK75824.1 | MSMEG_1846 | MSMEG_3411 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | MOSC domain protein; Identified by match to protein family HMM PF03473. | 0.675 |
| ABK73695.1 | fdhD | MSMEG_1846 | MSMEG_0165 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.837 |
| ABK73695.1 | iscS | MSMEG_1846 | MSMEG_1242 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Cysteine desulfurase IscS; Identified by match to protein family HMM PF00266. | 0.593 |
| ABK73695.1 | moaC | MSMEG_1846 | MSMEG_5703 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.679 |
| ABK73695.1 | moaE | MSMEG_1846 | MSMEG_5701 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391. | 0.524 |
| ABK73830.1 | fdhD | MSMEG_2837 | MSMEG_0165 | Nitrate reductase NarB; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.680 |
| ABK73830.1 | moaC | MSMEG_2837 | MSMEG_5703 | Nitrate reductase NarB; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.641 |
| ABK73830.1 | moaE | MSMEG_2837 | MSMEG_5701 | Nitrate reductase NarB; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391. | 0.432 |
| ABK73830.1 | mobA | MSMEG_2837 | MSMEG_4644 | Nitrate reductase NarB; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.429 |
| ABK75824.1 | ABK69650.1 | MSMEG_3411 | MSMEG_0743 | MOSC domain protein; Identified by match to protein family HMM PF03473. | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | 0.820 |
| ABK75824.1 | ABK73695.1 | MSMEG_3411 | MSMEG_1846 | MOSC domain protein; Identified by match to protein family HMM PF03473. | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | 0.675 |
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