STRINGSTRING
ABK70159.1 ABK70159.1 ABK74134.1 ABK74134.1 ABK74628.1 ABK74628.1 frc-2 frc-2 panE panE ABK74489.1 ABK74489.1 ABK71334.1 ABK71334.1 ABK75662.1 ABK75662.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70159.1Transmembrane transport protein; Identified by match to protein family HMM PF07690. (460 aa)    
Predicted Functional Partners:
ABK74134.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.578
ABK74628.1
Histone deacetylase superfamily protein; Identified by match to protein family HMM PF00850.
  
    0.547
frc-2
Formyl-coenzyme A transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.
 
    0.512
panE
2-dehydropantoate 2-reductase; Identified by match to protein family HMM PF02558; match to protein family HMM TIGR00745.
 
    0.478
ABK74489.1
ABC transporter, periplasmic substrate-binding protein, putative.
  
  
 0.428
ABK71334.1
ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein.
  
  
 0.425
ABK75662.1
Ferric iron-binding periplasmic protein of ABC transporter; Identified by match to protein family HMM PF01547.
  
  
 0.417
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (12%) [HD]