Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70132.1 | ABK70744.1 | MSMEG_0852 | MSMEG_0172 | CBS domain protein; Identified by match to protein family HMM PF00571. | Probable conserved transmembrane protein, putative. | 0.588 |
ABK70132.1 | ABK75781.1 | MSMEG_0852 | MSMEG_6290 | CBS domain protein; Identified by match to protein family HMM PF00571. | Putative DNA-binding protein. | 0.507 |
ABK70744.1 | ABK70132.1 | MSMEG_0172 | MSMEG_0852 | Probable conserved transmembrane protein, putative. | CBS domain protein; Identified by match to protein family HMM PF00571. | 0.588 |
ABK70744.1 | ABK70792.1 | MSMEG_0172 | MSMEG_6678 | Probable conserved transmembrane protein, putative. | Conserved hypothetical protein. | 0.484 |
ABK70744.1 | ABK71022.1 | MSMEG_0172 | MSMEG_0173 | Probable conserved transmembrane protein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.456 |
ABK70744.1 | ABK72165.1 | MSMEG_0172 | MSMEG_0174 | Probable conserved transmembrane protein, putative. | Putative inner membrane protein; Identified by match to protein family HMM PF02656. | 0.456 |
ABK70744.1 | ABK74141.1 | MSMEG_0172 | MSMEG_6847 | Probable conserved transmembrane protein, putative. | Conserved hypothetical protein. | 0.452 |
ABK70744.1 | ABK75781.1 | MSMEG_0172 | MSMEG_6290 | Probable conserved transmembrane protein, putative. | Putative DNA-binding protein. | 0.551 |
ABK70792.1 | ABK70744.1 | MSMEG_6678 | MSMEG_0172 | Conserved hypothetical protein. | Probable conserved transmembrane protein, putative. | 0.484 |
ABK70792.1 | ABK74141.1 | MSMEG_6678 | MSMEG_6847 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.539 |
ABK71022.1 | ABK70744.1 | MSMEG_0173 | MSMEG_0172 | Hypothetical protein; Identified by Glimmer2; putative. | Probable conserved transmembrane protein, putative. | 0.456 |
ABK71022.1 | ABK72165.1 | MSMEG_0173 | MSMEG_0174 | Hypothetical protein; Identified by Glimmer2; putative. | Putative inner membrane protein; Identified by match to protein family HMM PF02656. | 0.869 |
ABK72165.1 | ABK70744.1 | MSMEG_0174 | MSMEG_0172 | Putative inner membrane protein; Identified by match to protein family HMM PF02656. | Probable conserved transmembrane protein, putative. | 0.456 |
ABK72165.1 | ABK71022.1 | MSMEG_0174 | MSMEG_0173 | Putative inner membrane protein; Identified by match to protein family HMM PF02656. | Hypothetical protein; Identified by Glimmer2; putative. | 0.869 |
ABK74141.1 | ABK70744.1 | MSMEG_6847 | MSMEG_0172 | Conserved hypothetical protein. | Probable conserved transmembrane protein, putative. | 0.452 |
ABK74141.1 | ABK70792.1 | MSMEG_6847 | MSMEG_6678 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.539 |
ABK75781.1 | ABK70132.1 | MSMEG_6290 | MSMEG_0852 | Putative DNA-binding protein. | CBS domain protein; Identified by match to protein family HMM PF00571. | 0.507 |
ABK75781.1 | ABK70744.1 | MSMEG_6290 | MSMEG_0172 | Putative DNA-binding protein. | Probable conserved transmembrane protein, putative. | 0.551 |