Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69529.1 | ABK70491.1 | MSMEG_0176 | MSMEG_0178 | Glutamine ABC transporter periplasmic-binding protein; Identified by match to protein family HMM PF00497. | Identified by match to protein family HMM PF00005. | 0.969 |
| ABK69529.1 | ABK71022.1 | MSMEG_0176 | MSMEG_0173 | Glutamine ABC transporter periplasmic-binding protein; Identified by match to protein family HMM PF00497. | Hypothetical protein; Identified by Glimmer2; putative. | 0.540 |
| ABK69529.1 | ABK72165.1 | MSMEG_0176 | MSMEG_0174 | Glutamine ABC transporter periplasmic-binding protein; Identified by match to protein family HMM PF00497. | Putative inner membrane protein; Identified by match to protein family HMM PF02656. | 0.541 |
| ABK69529.1 | ABK72656.1 | MSMEG_0176 | MSMEG_0175 | Glutamine ABC transporter periplasmic-binding protein; Identified by match to protein family HMM PF00497. | FAD dependent oxidoreductase, putative; Identified by match to protein family HMM PF01266. | 0.785 |
| ABK69529.1 | ABK75561.1 | MSMEG_0176 | MSMEG_0177 | Glutamine ABC transporter periplasmic-binding protein; Identified by match to protein family HMM PF00497. | ABC polar amino acid family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.971 |
| ABK70491.1 | ABK69529.1 | MSMEG_0178 | MSMEG_0176 | Identified by match to protein family HMM PF00005. | Glutamine ABC transporter periplasmic-binding protein; Identified by match to protein family HMM PF00497. | 0.969 |
| ABK70491.1 | ABK71022.1 | MSMEG_0178 | MSMEG_0173 | Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by Glimmer2; putative. | 0.540 |
| ABK70491.1 | ABK72165.1 | MSMEG_0178 | MSMEG_0174 | Identified by match to protein family HMM PF00005. | Putative inner membrane protein; Identified by match to protein family HMM PF02656. | 0.542 |
| ABK70491.1 | ABK72656.1 | MSMEG_0178 | MSMEG_0175 | Identified by match to protein family HMM PF00005. | FAD dependent oxidoreductase, putative; Identified by match to protein family HMM PF01266. | 0.764 |
| ABK70491.1 | ABK75561.1 | MSMEG_0178 | MSMEG_0177 | Identified by match to protein family HMM PF00005. | ABC polar amino acid family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.980 |
| ABK71022.1 | ABK69529.1 | MSMEG_0173 | MSMEG_0176 | Hypothetical protein; Identified by Glimmer2; putative. | Glutamine ABC transporter periplasmic-binding protein; Identified by match to protein family HMM PF00497. | 0.540 |
| ABK71022.1 | ABK70491.1 | MSMEG_0173 | MSMEG_0178 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00005. | 0.540 |
| ABK71022.1 | ABK72165.1 | MSMEG_0173 | MSMEG_0174 | Hypothetical protein; Identified by Glimmer2; putative. | Putative inner membrane protein; Identified by match to protein family HMM PF02656. | 0.869 |
| ABK71022.1 | ABK72656.1 | MSMEG_0173 | MSMEG_0175 | Hypothetical protein; Identified by Glimmer2; putative. | FAD dependent oxidoreductase, putative; Identified by match to protein family HMM PF01266. | 0.546 |
| ABK71022.1 | ABK75561.1 | MSMEG_0173 | MSMEG_0177 | Hypothetical protein; Identified by Glimmer2; putative. | ABC polar amino acid family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.541 |
| ABK71937.1 | ABK72656.1 | MSMEG_0665 | MSMEG_0175 | Sarcosine oxidase subunit beta, putative; Identified by match to protein family HMM PF01266. | FAD dependent oxidoreductase, putative; Identified by match to protein family HMM PF01266. | 0.568 |
| ABK71937.1 | ABK74752.1 | MSMEG_0665 | MSMEG_3708 | Sarcosine oxidase subunit beta, putative; Identified by match to protein family HMM PF01266. | Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | 0.495 |
| ABK71937.1 | gcvT | MSMEG_0665 | MSMEG_4278 | Sarcosine oxidase subunit beta, putative; Identified by match to protein family HMM PF01266. | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.555 |
| ABK71937.1 | katA | MSMEG_0665 | MSMEG_3486 | Sarcosine oxidase subunit beta, putative; Identified by match to protein family HMM PF01266. | Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199. | 0.503 |
| ABK71937.1 | katA-2 | MSMEG_0665 | MSMEG_6232 | Sarcosine oxidase subunit beta, putative; Identified by match to protein family HMM PF01266. | Catalase KatA; Identified by similarity to SP:P26901; match to protein family HMM PF00199. | 0.489 |
page 1 of 3