Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69674.1 | ABK70672.1 | MSMEG_0474 | MSMEG_0501 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | 0.916 |
| ABK69674.1 | ABK75724.1 | MSMEG_0474 | MSMEG_0191 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | Identified by match to protein family HMM PF01869. | 0.984 |
| ABK69674.1 | glmM | MSMEG_0474 | MSMEG_1559 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.953 |
| ABK69674.1 | glmS | MSMEG_0474 | MSMEG_1568 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.915 |
| ABK69674.1 | glmS-2 | MSMEG_0474 | MSMEG_5986 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135. | 0.902 |
| ABK69674.1 | nagA | MSMEG_0474 | MSMEG_2119 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.984 |
| ABK69674.1 | nagB | MSMEG_0474 | MSMEG_2118 | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.916 |
| ABK70672.1 | ABK69674.1 | MSMEG_0501 | MSMEG_0474 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | 0.916 |
| ABK70672.1 | ABK75724.1 | MSMEG_0501 | MSMEG_0191 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | Identified by match to protein family HMM PF01869. | 0.935 |
| ABK70672.1 | glmM | MSMEG_0501 | MSMEG_1559 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.936 |
| ABK70672.1 | glmS | MSMEG_0501 | MSMEG_1568 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.933 |
| ABK70672.1 | glmS-2 | MSMEG_0501 | MSMEG_5986 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135. | 0.917 |
| ABK70672.1 | murQ | MSMEG_0501 | MSMEG_0193 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | Putative glucokinase regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.433 |
| ABK70672.1 | nagA | MSMEG_0501 | MSMEG_2119 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | N-acetylglucosamine-6-phosphate deacetylase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221. | 0.996 |
| ABK70672.1 | nagB | MSMEG_0501 | MSMEG_2118 | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.908 |
| ABK74877.1 | ABK75724.1 | MSMEG_0190 | MSMEG_0191 | Integral membrane transport protein; Identified by match to protein family HMM PF00474; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Identified by match to protein family HMM PF01869. | 0.831 |
| ABK74877.1 | anmK | MSMEG_0190 | MSMEG_0189 | Integral membrane transport protein; Identified by match to protein family HMM PF00474; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.830 |
| ABK74877.1 | murQ | MSMEG_0190 | MSMEG_0193 | Integral membrane transport protein; Identified by match to protein family HMM PF00474; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Putative glucokinase regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.635 |
| ABK75724.1 | ABK69674.1 | MSMEG_0191 | MSMEG_0474 | Identified by match to protein family HMM PF01869. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380. | 0.984 |
| ABK75724.1 | ABK70672.1 | MSMEG_0191 | MSMEG_0501 | Identified by match to protein family HMM PF01869. | Glucosamine-6-phosphate deaminase 1; Identified by match to protein family HMM PF01182. | 0.935 |
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