Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69877.1 | ABK74482.1 | MSMEG_0502 | MSMEG_2116 | Glucosidase; Identified by match to protein family HMM PF02056. | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826. | 0.725 |
| ABK69877.1 | ABK75578.1 | MSMEG_0502 | MSMEG_0192 | Glucosidase; Identified by match to protein family HMM PF02056. | Transcriptional regulator, RpiR family protein; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. | 0.461 |
| ABK69877.1 | murQ | MSMEG_0502 | MSMEG_0193 | Glucosidase; Identified by match to protein family HMM PF02056. | Putative glucokinase regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.431 |
| ABK70442.1 | ABK74482.1 | MSMEG_0085 | MSMEG_2116 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826. | 0.988 |
| ABK70442.1 | ABK75578.1 | MSMEG_0085 | MSMEG_0192 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | Transcriptional regulator, RpiR family protein; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. | 0.478 |
| ABK70568.1 | ABK74877.1 | MSMEG_0187 | MSMEG_0190 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Integral membrane transport protein; Identified by match to protein family HMM PF00474; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.749 |
| ABK70568.1 | ABK75578.1 | MSMEG_0187 | MSMEG_0192 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Transcriptional regulator, RpiR family protein; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. | 0.471 |
| ABK70568.1 | ABK75724.1 | MSMEG_0187 | MSMEG_0191 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Identified by match to protein family HMM PF01869. | 0.738 |
| ABK70568.1 | anmK | MSMEG_0187 | MSMEG_0189 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.783 |
| ABK70568.1 | murQ | MSMEG_0187 | MSMEG_0193 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Putative glucokinase regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.454 |
| ABK70873.1 | ABK74482.1 | MSMEG_0361 | MSMEG_2116 | Identified by match to protein family HMM PF00933. | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826. | 0.426 |
| ABK70873.1 | ABK75578.1 | MSMEG_0361 | MSMEG_0192 | Identified by match to protein family HMM PF00933. | Transcriptional regulator, RpiR family protein; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. | 0.449 |
| ABK70873.1 | ABK75724.1 | MSMEG_0361 | MSMEG_0191 | Identified by match to protein family HMM PF00933. | Identified by match to protein family HMM PF01869. | 0.449 |
| ABK70873.1 | anmK | MSMEG_0361 | MSMEG_0189 | Identified by match to protein family HMM PF00933. | Conserved hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.459 |
| ABK70873.1 | murQ | MSMEG_0361 | MSMEG_0193 | Identified by match to protein family HMM PF00933. | Putative glucokinase regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.918 |
| ABK70986.1 | ABK75578.1 | MSMEG_0512 | MSMEG_0192 | Identified by match to protein family HMM PF01869. | Transcriptional regulator, RpiR family protein; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418. | 0.467 |
| ABK70986.1 | murQ | MSMEG_0512 | MSMEG_0193 | Identified by match to protein family HMM PF01869. | Putative glucokinase regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.606 |
| ABK74482.1 | ABK69877.1 | MSMEG_2116 | MSMEG_0502 | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826. | Glucosidase; Identified by match to protein family HMM PF02056. | 0.725 |
| ABK74482.1 | ABK70442.1 | MSMEG_2116 | MSMEG_0085 | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826. | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | 0.988 |
| ABK74482.1 | ABK70873.1 | MSMEG_2116 | MSMEG_0361 | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826. | Identified by match to protein family HMM PF00933. | 0.426 |
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