Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69831.1 | ABK70779.1 | MSMEG_3242 | MSMEG_0447 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | 0.538 |
| ABK69831.1 | ABK70862.1 | MSMEG_3242 | MSMEG_3662 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Mannose-binding lectin; Identified by match to protein family HMM PF01453; match to protein family HMM PF01476. | 0.410 |
| ABK69831.1 | ABK73759.1 | MSMEG_3242 | MSMEG_3288 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | LysM domain protein; Identified by match to protein family HMM PF01476. | 0.408 |
| ABK69831.1 | ABK74318.1 | MSMEG_3242 | MSMEG_3437 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Identified by match to protein family HMM PF00756; match to protein family HMM PF01476. | 0.416 |
| ABK69831.1 | ABK74475.1 | MSMEG_3242 | MSMEG_5700 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Identified by match to protein family HMM PF06737. | 0.408 |
| ABK69831.1 | ABK74867.1 | MSMEG_3242 | MSMEG_3330 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.451 |
| ABK69831.1 | ABK76172.1 | MSMEG_3242 | MSMEG_0200 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.421 |
| ABK69831.1 | dps | MSMEG_3242 | MSMEG_6467 | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | Starvation-induced DNA protecting protein; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (By similarity). It protects DNA from hydroxyl radical-mediated cleavage. Binds DNA with no apparent sequence specificity without self- aggregation nor promotion of DNA condensation. Is unable to protect DNA from DNase-mediated cleavage (By similarity). | 0.423 |
| ABK70779.1 | ABK69831.1 | MSMEG_0447 | MSMEG_3242 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | 0.538 |
| ABK70779.1 | ABK70862.1 | MSMEG_0447 | MSMEG_3662 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Mannose-binding lectin; Identified by match to protein family HMM PF01453; match to protein family HMM PF01476. | 0.410 |
| ABK70779.1 | ABK72925.1 | MSMEG_0447 | MSMEG_0007 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Conserved hypothetical protein. | 0.425 |
| ABK70779.1 | ABK73759.1 | MSMEG_0447 | MSMEG_3288 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | LysM domain protein; Identified by match to protein family HMM PF01476. | 0.405 |
| ABK70779.1 | ABK74318.1 | MSMEG_0447 | MSMEG_3437 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Identified by match to protein family HMM PF00756; match to protein family HMM PF01476. | 0.406 |
| ABK70779.1 | ABK74475.1 | MSMEG_0447 | MSMEG_5700 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Identified by match to protein family HMM PF06737. | 0.408 |
| ABK70779.1 | ABK74867.1 | MSMEG_0447 | MSMEG_3330 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.506 |
| ABK70779.1 | ABK76172.1 | MSMEG_0447 | MSMEG_0200 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Hypothetical protein; Identified by Glimmer2; putative. | 0.410 |
| ABK70779.1 | dps | MSMEG_0447 | MSMEG_6467 | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | Starvation-induced DNA protecting protein; Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction (By similarity). It protects DNA from hydroxyl radical-mediated cleavage. Binds DNA with no apparent sequence specificity without self- aggregation nor promotion of DNA condensation. Is unable to protect DNA from DNase-mediated cleavage (By similarity). | 0.537 |
| ABK70862.1 | ABK69831.1 | MSMEG_3662 | MSMEG_3242 | Mannose-binding lectin; Identified by match to protein family HMM PF01453; match to protein family HMM PF01476. | Starvation-inducible DNA-binding protein or fine tangled pili major subunit; Identified by match to protein family HMM PF00210; Belongs to the Dps family. | 0.410 |
| ABK70862.1 | ABK70779.1 | MSMEG_3662 | MSMEG_0447 | Mannose-binding lectin; Identified by match to protein family HMM PF01453; match to protein family HMM PF01476. | Conserved hypothetical protein; Identified by match to protein family HMM PF02566. | 0.410 |
| ABK70862.1 | ABK72925.1 | MSMEG_3662 | MSMEG_0007 | Mannose-binding lectin; Identified by match to protein family HMM PF01453; match to protein family HMM PF01476. | Conserved hypothetical protein. | 0.584 |
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