Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69984.1 | ABK72774.1 | MSMEG_5537 | MSMEG_0204 | Conserved integral membrane protein; Identified by match to protein family HMM PF01757. | Hypothetical protein; Identified by Glimmer2; putative. | 0.434 |
| ABK69984.1 | ABK75770.1 | MSMEG_5537 | MSMEG_6752 | Conserved integral membrane protein; Identified by match to protein family HMM PF01757. | Identified by match to protein family HMM PF01341; Belongs to the glycosyl hydrolase family 6. | 0.470 |
| ABK70783.1 | ABK72774.1 | MSMEG_6317 | MSMEG_0204 | Lipolytic enzyme, G-D-S-L; Identified by match to protein family HMM PF00657. | Hypothetical protein; Identified by Glimmer2; putative. | 0.434 |
| ABK70783.1 | ABK75770.1 | MSMEG_6317 | MSMEG_6752 | Lipolytic enzyme, G-D-S-L; Identified by match to protein family HMM PF00657. | Identified by match to protein family HMM PF01341; Belongs to the glycosyl hydrolase family 6. | 0.441 |
| ABK71378.1 | ABK72774.1 | MSMEG_0203 | MSMEG_0204 | IS1096, tnpR protein; Identified by similarity to GP:150004; match to protein family HMM PF07929. | Hypothetical protein; Identified by Glimmer2; putative. | 0.502 |
| ABK72746.1 | ABK72774.1 | MSMEG_1528 | MSMEG_0204 | Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle. | Hypothetical protein; Identified by Glimmer2; putative. | 0.430 |
| ABK72746.1 | ABK75770.1 | MSMEG_1528 | MSMEG_6752 | Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle. | Identified by match to protein family HMM PF01341; Belongs to the glycosyl hydrolase family 6. | 0.434 |
| ABK72774.1 | ABK69984.1 | MSMEG_0204 | MSMEG_5537 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved integral membrane protein; Identified by match to protein family HMM PF01757. | 0.434 |
| ABK72774.1 | ABK70783.1 | MSMEG_0204 | MSMEG_6317 | Hypothetical protein; Identified by Glimmer2; putative. | Lipolytic enzyme, G-D-S-L; Identified by match to protein family HMM PF00657. | 0.434 |
| ABK72774.1 | ABK71378.1 | MSMEG_0204 | MSMEG_0203 | Hypothetical protein; Identified by Glimmer2; putative. | IS1096, tnpR protein; Identified by similarity to GP:150004; match to protein family HMM PF07929. | 0.502 |
| ABK72774.1 | ABK72746.1 | MSMEG_0204 | MSMEG_1528 | Hypothetical protein; Identified by Glimmer2; putative. | Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle. | 0.430 |
| ABK72774.1 | ABK73492.1 | MSMEG_0204 | MSMEG_5272 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved exported protein; Identified by match to protein family HMM PF00657. | 0.430 |
| ABK72774.1 | ABK73885.1 | MSMEG_0204 | MSMEG_5952 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF00657. | 0.437 |
| ABK72774.1 | ABK74262.1 | MSMEG_0204 | MSMEG_3489 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF00657. | 0.431 |
| ABK72774.1 | ABK74838.1 | MSMEG_0204 | MSMEG_5953 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.439 |
| ABK72774.1 | ABK75351.1 | MSMEG_0204 | MSMEG_6892 | Hypothetical protein; Identified by Glimmer2; putative. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.439 |
| ABK72774.1 | ABK75770.1 | MSMEG_0204 | MSMEG_6752 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF01341; Belongs to the glycosyl hydrolase family 6. | 0.439 |
| ABK73492.1 | ABK72774.1 | MSMEG_5272 | MSMEG_0204 | Conserved exported protein; Identified by match to protein family HMM PF00657. | Hypothetical protein; Identified by Glimmer2; putative. | 0.430 |
| ABK73492.1 | ABK75770.1 | MSMEG_5272 | MSMEG_6752 | Conserved exported protein; Identified by match to protein family HMM PF00657. | Identified by match to protein family HMM PF01341; Belongs to the glycosyl hydrolase family 6. | 0.434 |
| ABK73885.1 | ABK72774.1 | MSMEG_5952 | MSMEG_0204 | Conserved hypothetical protein, putative; Identified by match to protein family HMM PF00657. | Hypothetical protein; Identified by Glimmer2; putative. | 0.437 |
page 1 of 2