STRINGSTRING
ABK73191.1 ABK73191.1 ABK70908.1 ABK70908.1 ABK75538.1 ABK75538.1 ABK71208.1 ABK71208.1 ABK74848.1 ABK74848.1 ABK72405.1 ABK72405.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73191.1MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047; match to protein family HMM PF01978. (146 aa)    
Predicted Functional Partners:
ABK70908.1
Tetracenomycin polyketide synthesis hydroxylase TcmH; Identified by match to protein family HMM PF03992.
  
  
 0.616
ABK75538.1
TetR family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.459
ABK71208.1
Transcriptional regulator; Identified by match to protein family HMM PF01047.
  
  
 0.451
ABK74848.1
Identified by match to protein family HMM PF00903.
 
    0.436
ABK72405.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02566.
 
  
 0.416
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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