Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70482.1 | ABK70936.1 | MSMEG_5005 | MSMEG_2333 | LprC protein. | Conserved hypothetical protein. | 0.771 |
ABK70482.1 | ABK71593.1 | MSMEG_5005 | MSMEG_5007 | LprC protein. | LprB protein. | 0.997 |
ABK70482.1 | ABK73105.1 | MSMEG_5005 | MSMEG_0222 | LprC protein. | Conserved hypothetical protein. | 0.680 |
ABK70482.1 | ABK73301.1 | MSMEG_5005 | MSMEG_0223 | LprC protein. | Conserved hypothetical protein. | 0.675 |
ABK70482.1 | ABK73452.1 | MSMEG_5005 | MSMEG_5205 | LprC protein. | Conserved hypothetical protein. | 0.757 |
ABK70482.1 | ABK74560.1 | MSMEG_5005 | MSMEG_0909 | LprC protein. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.774 |
ABK70482.1 | ABK75153.1 | MSMEG_5005 | MSMEG_1053 | LprC protein. | Conserved hypothetical protein. | 0.774 |
ABK70936.1 | ABK70482.1 | MSMEG_2333 | MSMEG_5005 | Conserved hypothetical protein. | LprC protein. | 0.771 |
ABK70936.1 | ABK71593.1 | MSMEG_2333 | MSMEG_5007 | Conserved hypothetical protein. | LprB protein. | 0.773 |
ABK70936.1 | ABK73105.1 | MSMEG_2333 | MSMEG_0222 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.735 |
ABK70936.1 | ABK73301.1 | MSMEG_2333 | MSMEG_0223 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.736 |
ABK70936.1 | ABK73452.1 | MSMEG_2333 | MSMEG_5205 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
ABK70936.1 | ABK74560.1 | MSMEG_2333 | MSMEG_0909 | Conserved hypothetical protein. | acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. | 0.763 |
ABK71473.1 | ABK73105.1 | MSMEG_0224 | MSMEG_0222 | O-methyltransferase MdmC; Identified by match to protein family HMM PF01135; match to protein family HMM PF01596. | Conserved hypothetical protein. | 0.787 |
ABK71473.1 | ABK73301.1 | MSMEG_0224 | MSMEG_0223 | O-methyltransferase MdmC; Identified by match to protein family HMM PF01135; match to protein family HMM PF01596. | Conserved hypothetical protein. | 0.747 |
ABK71473.1 | ABK74423.1 | MSMEG_0224 | MSMEG_0220 | O-methyltransferase MdmC; Identified by match to protein family HMM PF01135; match to protein family HMM PF01596. | Monoglyceride lipase; Involved in the hydrolysis of exogenous host. Catalyzes the hydrolysis of long-chain monoacylglycerol. It hydrolyzes monoolein and monoacylglycerols (MAG) with fatty acid chains ranging from C14 to C18, but is unable to hydrolyze long-chain diacylglycerol (DAG). | 0.631 |
ABK71473.1 | ABK74753.1 | MSMEG_0224 | MSMEG_0221 | O-methyltransferase MdmC; Identified by match to protein family HMM PF01135; match to protein family HMM PF01596. | Secreted protein. | 0.625 |
ABK71593.1 | ABK70482.1 | MSMEG_5007 | MSMEG_5005 | LprB protein. | LprC protein. | 0.997 |
ABK71593.1 | ABK70936.1 | MSMEG_5007 | MSMEG_2333 | LprB protein. | Conserved hypothetical protein. | 0.773 |
ABK71593.1 | ABK73105.1 | MSMEG_5007 | MSMEG_0222 | LprB protein. | Conserved hypothetical protein. | 0.674 |
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