STRINGSTRING
ABK73296.1 ABK73296.1 ABK69899.1 ABK69899.1 ABK74588.1 ABK74588.1 ABK73333.1 ABK73333.1 ABK69676.1 ABK69676.1 ABK75876.1 ABK75876.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73296.1MmpS5 protein; Identified by match to protein family HMM PF05423. (142 aa)    
Predicted Functional Partners:
ABK69899.1
MmpL5 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
  
 0.895
ABK74588.1
MmpL5 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
  
 0.893
ABK73333.1
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.815
ABK69676.1
MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
    0.784
ABK75876.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
  
 0.730
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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