Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69676.1 | ABK73296.1 | MSMEG_0225 | MSMEG_0226 | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | MmpS5 protein; Identified by match to protein family HMM PF05423. | 0.784 |
ABK69676.1 | ABK75876.1 | MSMEG_0225 | MSMEG_0227 | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.480 |
ABK69899.1 | ABK73296.1 | MSMEG_4383 | MSMEG_0226 | MmpL5 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | MmpS5 protein; Identified by match to protein family HMM PF05423. | 0.895 |
ABK73296.1 | ABK69676.1 | MSMEG_0226 | MSMEG_0225 | MmpS5 protein; Identified by match to protein family HMM PF05423. | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | 0.784 |
ABK73296.1 | ABK69899.1 | MSMEG_0226 | MSMEG_4383 | MmpS5 protein; Identified by match to protein family HMM PF05423. | MmpL5 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | 0.895 |
ABK73296.1 | ABK73333.1 | MSMEG_0226 | MSMEG_1780 | MmpS5 protein; Identified by match to protein family HMM PF05423. | Hypothetical protein; Identified by Glimmer2; putative. | 0.815 |
ABK73296.1 | ABK74588.1 | MSMEG_0226 | MSMEG_1382 | MmpS5 protein; Identified by match to protein family HMM PF05423. | MmpL5 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | 0.893 |
ABK73296.1 | ABK75876.1 | MSMEG_0226 | MSMEG_0227 | MmpS5 protein; Identified by match to protein family HMM PF05423. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.730 |
ABK73333.1 | ABK73296.1 | MSMEG_1780 | MSMEG_0226 | Hypothetical protein; Identified by Glimmer2; putative. | MmpS5 protein; Identified by match to protein family HMM PF05423. | 0.815 |
ABK74588.1 | ABK73296.1 | MSMEG_1382 | MSMEG_0226 | MmpL5 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | MmpS5 protein; Identified by match to protein family HMM PF05423. | 0.893 |
ABK75876.1 | ABK69676.1 | MSMEG_0227 | MSMEG_0225 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833. | 0.480 |
ABK75876.1 | ABK73296.1 | MSMEG_0227 | MSMEG_0226 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | MmpS5 protein; Identified by match to protein family HMM PF05423. | 0.730 |