STRINGSTRING
ABK76034.1 ABK76034.1 ABK70790.1 ABK70790.1 ABK74802.1 ABK74802.1 ABK71413.1 ABK71413.1 crgA crgA ABK71619.1 ABK71619.1 ABK70640.1 ABK70640.1 rpfB rpfB ABK72735.1 ABK72735.1 ABK72472.1 ABK72472.1 ABK69964.1 ABK69964.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ABK76034.1Lipoprotein Lpps; Identified by match to protein family HMM PF03734. (346 aa)    
Predicted Functional Partners:
ABK70790.1
Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM PF03793.
 
  
 0.693
ABK74802.1
Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717.
  
  
 0.637
ABK71413.1
Identified by match to protein family HMM PF07690.
  
    0.531
crgA
Putative membrane protein; Involved in cell division; Belongs to the CrgA family.
  
  
 0.480
ABK71619.1
Serine protease; Identified by match to protein family HMM PF00089; match to protein family HMM PF02674.
 
  
 0.472
ABK70640.1
Conserved hypothetical protein.
  
    0.449
rpfB
Resuscitation-promoting factor RpfB; Factor that stimulates resuscitation of dormant cells. Has peptidoglycan (PG) hydrolytic activity. Active in the pM concentration range. Has little to no effect on actively-growing cells. PG fragments could either directly activate the resuscitation pathway of dormant bacteria or serve as a substrate for endogenous Rpf, resulting in low molecular weight products with resuscitation activity (By similarity). Belongs to the transglycosylase family. Rpf subfamily.
 
  
 0.449
ABK72735.1
Conserved hypothetical protein.
  
  
 0.445
ABK72472.1
DNA polymerase III, delta subunit; Identified by match to protein family HMM PF06144.
  
    0.445
ABK69964.1
Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
    0.442
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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