Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70258.1 | ABK70316.1 | MSMEG_0262 | MSMEG_6547 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.473 |
ABK70258.1 | ABK70468.1 | MSMEG_0262 | MSMEG_2994 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Identified by match to protein family HMM PF04909. | 0.465 |
ABK70258.1 | ABK70713.1 | MSMEG_0262 | MSMEG_0263 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.961 |
ABK70258.1 | ABK71957.1 | MSMEG_0262 | MSMEG_4773 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Identified by match to protein family HMM PF04909. | 0.447 |
ABK70258.1 | ABK72357.1 | MSMEG_0262 | MSMEG_4884 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Conserved hypothetical protein. | 0.707 |
ABK70258.1 | ABK72866.1 | MSMEG_0262 | MSMEG_0264 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Transmembrane transport protein; Identified by match to protein family HMM PF07690. | 0.746 |
ABK70258.1 | ABK73240.1 | MSMEG_0262 | MSMEG_4837 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.462 |
ABK70258.1 | ABK74782.1 | MSMEG_0262 | MSMEG_2230 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Identified by match to protein family HMM PF04909. | 0.412 |
ABK70258.1 | ABK75292.1 | MSMEG_0262 | MSMEG_0261 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | P40 protein. | 0.832 |
ABK70316.1 | ABK70258.1 | MSMEG_6547 | MSMEG_0262 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.473 |
ABK70316.1 | ABK70713.1 | MSMEG_6547 | MSMEG_0263 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.746 |
ABK70316.1 | ABK72357.1 | MSMEG_6547 | MSMEG_4884 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.769 |
ABK70316.1 | ABK74844.1 | MSMEG_6547 | MSMEG_4814 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.751 |
ABK70468.1 | ABK70258.1 | MSMEG_2994 | MSMEG_0262 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.465 |
ABK70468.1 | ABK70713.1 | MSMEG_2994 | MSMEG_0263 | Identified by match to protein family HMM PF04909. | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | 0.724 |
ABK70468.1 | ABK72357.1 | MSMEG_2994 | MSMEG_4884 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.768 |
ABK70468.1 | ABK74844.1 | MSMEG_2994 | MSMEG_4814 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein; Identified by match to protein family HMM PF01796. | 0.715 |
ABK70713.1 | ABK70258.1 | MSMEG_0263 | MSMEG_0262 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.961 |
ABK70713.1 | ABK70316.1 | MSMEG_0263 | MSMEG_6547 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.746 |
ABK70713.1 | ABK70468.1 | MSMEG_0263 | MSMEG_2994 | Amidohydrolase 3; Identified by match to protein family HMM PF07969. | Identified by match to protein family HMM PF04909. | 0.724 |
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