Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69779.1 | ABK75092.1 | MSMEG_0444 | MSMEG_0266 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | 0.929 |
| ABK69779.1 | speB | MSMEG_0444 | MSMEG_1072 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.914 |
| ABK69779.1 | speB-3 | MSMEG_0444 | MSMEG_4374 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.914 |
| ABK69779.1 | speB-4 | MSMEG_0444 | MSMEG_4459 | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.914 |
| ABK70258.1 | ABK72866.1 | MSMEG_0262 | MSMEG_0264 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Transmembrane transport protein; Identified by match to protein family HMM PF07690. | 0.746 |
| ABK70258.1 | ABK75092.1 | MSMEG_0262 | MSMEG_0266 | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | 0.604 |
| ABK72866.1 | ABK70258.1 | MSMEG_0264 | MSMEG_0262 | Transmembrane transport protein; Identified by match to protein family HMM PF07690. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.746 |
| ABK72866.1 | ABK75092.1 | MSMEG_0264 | MSMEG_0266 | Transmembrane transport protein; Identified by match to protein family HMM PF07690. | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | 0.673 |
| ABK75092.1 | ABK69779.1 | MSMEG_0266 | MSMEG_0444 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatine deiminase; Identified by match to protein family HMM PF04371; Belongs to the agmatine deiminase family. | 0.929 |
| ABK75092.1 | ABK70258.1 | MSMEG_0266 | MSMEG_0262 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Conserved hypothetical protein; Belongs to the CoA-transferase III family. | 0.604 |
| ABK75092.1 | ABK72866.1 | MSMEG_0266 | MSMEG_0264 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Transmembrane transport protein; Identified by match to protein family HMM PF07690. | 0.673 |
| ABK75092.1 | arcA | MSMEG_0266 | MSMEG_1409 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.837 |
| ABK75092.1 | arcA-2 | MSMEG_0266 | MSMEG_5448 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Arginine deiminase; Identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.838 |
| ABK75092.1 | argH | MSMEG_0266 | MSMEG_3769 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838. | 0.827 |
| ABK75092.1 | speB | MSMEG_0266 | MSMEG_1072 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.918 |
| ABK75092.1 | speB-2 | MSMEG_0266 | MSMEG_3535 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.640 |
| ABK75092.1 | speB-3 | MSMEG_0266 | MSMEG_4374 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.918 |
| ABK75092.1 | speB-4 | MSMEG_0266 | MSMEG_4459 | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. | 0.918 |
| arcA | ABK75092.1 | MSMEG_1409 | MSMEG_0266 | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | Arginine decarboxylase; Identified by match to protein family HMM PF01276; match to protein family HMM PF03711. | 0.837 |
| arcA | arcA-2 | MSMEG_1409 | MSMEG_5448 | Arginine deiminase; Identified by similarity to SP:P13981; match to protein family HMM PF02274; match to protein family HMM TIGR01078. | Arginine deiminase; Identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078. | 0.912 |
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