STRINGSTRING
ABK74854.1 ABK74854.1 ABK69839.1 ABK69839.1 ABK75166.1 ABK75166.1 ABK72692.1 ABK72692.1 ABK74973.1 ABK74973.1 ABK69722.1 ABK69722.1 ABK69789.1 ABK69789.1 ABK72673.1 ABK72673.1 ABK70278.1 ABK70278.1 ABK71644.1 ABK71644.1 ABK71758.1 ABK71758.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74854.1Propanediol utilization protein PduA; Identified by match to protein family HMM PF00936. (93 aa)    
Predicted Functional Partners:
ABK69839.1
Ethanolamine utilization protein EutN; Identified by match to protein family HMM PF03319.
 
 
 0.996
ABK75166.1
Conserved hypothetical protein.
 
 
 0.961
ABK72692.1
Identified by match to protein family HMM PF00936.
 
 
 0.953
ABK74973.1
Aldehyde-alcohol dehydrogenase; Identified by match to protein family HMM PF00171.
 
  
 0.933
ABK69722.1
Aminoglycoside phosphotransferase; Identified by match to protein family HMM PF01636.
  
    0.801
ABK69789.1
Propanediol utilization: dehydratase, medium subunit; Identified by match to protein family HMM PF02288.
 
  
 0.793
ABK72673.1
Putative aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
    0.768
ABK70278.1
Coenzyme B12-dependent glycerol dehydrogenase small subunit.
 
  
 0.768
ABK71644.1
Diol dehydrase gamma subunit.
 
  
 0.766
ABK71758.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.765
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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