Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70468.1 | ABK70765.1 | MSMEG_2994 | MSMEG_0300 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.744 |
ABK70468.1 | ABK71349.1 | MSMEG_2994 | MSMEG_4809 | Identified by match to protein family HMM PF04909. | Rieske [2Fe-2S] domain, putative; Identified by match to protein family HMM PF00355. | 0.524 |
ABK70468.1 | ABK72333.1 | MSMEG_2994 | MSMEG_2553 | Identified by match to protein family HMM PF04909. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.652 |
ABK70468.1 | ABK72974.1 | MSMEG_2994 | MSMEG_5629 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.754 |
ABK70468.1 | ABK73531.1 | MSMEG_2994 | MSMEG_4815 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.774 |
ABK70468.1 | ABK73608.1 | MSMEG_2994 | MSMEG_4779 | Identified by match to protein family HMM PF04909. | Probable regulatory protein; Identified by match to protein family HMM PF00440. | 0.706 |
ABK70468.1 | ABK74316.1 | MSMEG_2994 | MSMEG_4810 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.768 |
ABK70765.1 | ABK70468.1 | MSMEG_0300 | MSMEG_2994 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.744 |
ABK70765.1 | ABK71349.1 | MSMEG_0300 | MSMEG_4809 | Identified by match to protein family HMM PF04909. | Rieske [2Fe-2S] domain, putative; Identified by match to protein family HMM PF00355. | 0.793 |
ABK70765.1 | ABK71781.1 | MSMEG_0300 | MSMEG_2235 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.717 |
ABK70765.1 | ABK71957.1 | MSMEG_0300 | MSMEG_4773 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.753 |
ABK70765.1 | ABK72333.1 | MSMEG_0300 | MSMEG_2553 | Identified by match to protein family HMM PF04909. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.719 |
ABK70765.1 | ABK72974.1 | MSMEG_0300 | MSMEG_5629 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.745 |
ABK70765.1 | ABK73531.1 | MSMEG_0300 | MSMEG_4815 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.740 |
ABK70765.1 | ABK73608.1 | MSMEG_0300 | MSMEG_4779 | Identified by match to protein family HMM PF04909. | Probable regulatory protein; Identified by match to protein family HMM PF00440. | 0.762 |
ABK70765.1 | ABK74316.1 | MSMEG_0300 | MSMEG_4810 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.807 |
ABK70765.1 | ABK74782.1 | MSMEG_0300 | MSMEG_2230 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.759 |
ABK71349.1 | ABK70468.1 | MSMEG_4809 | MSMEG_2994 | Rieske [2Fe-2S] domain, putative; Identified by match to protein family HMM PF00355. | Identified by match to protein family HMM PF04909. | 0.524 |
ABK71349.1 | ABK70765.1 | MSMEG_4809 | MSMEG_0300 | Rieske [2Fe-2S] domain, putative; Identified by match to protein family HMM PF00355. | Identified by match to protein family HMM PF04909. | 0.793 |
ABK71349.1 | ABK71781.1 | MSMEG_4809 | MSMEG_2235 | Rieske [2Fe-2S] domain, putative; Identified by match to protein family HMM PF00355. | Identified by match to protein family HMM PF04909. | 0.408 |
page 1 of 5