STRINGSTRING
ABK75841.1 ABK75841.1 ABK76225.1 ABK76225.1 ABK75134.1 ABK75134.1 ABK72700.1 ABK72700.1 ABK74473.1 ABK74473.1 ABK71223.1 ABK71223.1 ABK71774.1 ABK71774.1 ABK70529.1 ABK70529.1 pks pks ABK75467.1 ABK75467.1 ABK72679.1 ABK72679.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75841.1Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107. (330 aa)    
Predicted Functional Partners:
ABK76225.1
trans-2-enoyl-CoA reductase; Identified by match to protein family HMM PF00107.
  
    0.665
ABK75134.1
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913.
  
  
 0.572
ABK72700.1
2-deoxy-scyllo-inosamine dehydrogenase; Identified by match to protein family HMM PF00107.
 
  
 0.532
ABK74473.1
Alcohol dehydrogenase, zinc-containing; Identified by match to protein family HMM PF00107.
 
  
 0.505
ABK71223.1
L-idonate 5-dehydrogenase; Identified by match to protein family HMM PF00107.
 
  
 0.504
ABK71774.1
Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.
 
 
 0.460
ABK70529.1
Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.
 
 
 0.454
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
  
 
0.448
ABK75467.1
Polyketide synthetase mbtd; Identified by match to protein family HMM PF00106; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370.
  
 
 0.422
ABK72679.1
Toluate 1,2-dioxygenase electron transfer component; Identified by match to protein family HMM PF00106; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM PF07729; match to protein family HMM PF08021.
  
 0.401
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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