STRINGSTRING
ABK75380.1 ABK75380.1 ABK75558.1 ABK75558.1 aftD aftD ABK75288.1 ABK75288.1 ABK70327.1 ABK70327.1 ABK73284.1 ABK73284.1 aftC aftC ABK75913.1 ABK75913.1 ABK74852.1 ABK74852.1 ABK71798.1 ABK71798.1 ABK75671.1 ABK75671.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75380.1Probable conserved transmembrane protein. (545 aa)    
Predicted Functional Partners:
ABK75558.1
Conserved hypothetical protein.
 
  
 0.984
aftD
Conserved hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
 
  
 0.978
ABK75288.1
Acyltransferase; Identified by match to protein family HMM PF01757.
 
  
 0.800
ABK70327.1
Conserved hypothetical protein.
  
  
 0.713
ABK73284.1
Glycosyltransferase; Identified by match to protein family HMM PF00534.
  
  
 0.709
aftC
Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
  
    0.707
ABK75913.1
Putative membrane protein.
  
    0.693
ABK74852.1
Conserved hypothetical protein.
 
    0.690
ABK71798.1
Conserved hypothetical protein.
  
     0.675
ABK75671.1
Probable conserved transmembrane protein.
 
  
 0.654
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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